RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ATG7O95352 703 aa20.3■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CCNE2O96020 404 aa20.3■□□□□ 0.84
TNFRSF1A-209ENST00000536717 ATP2A2P16615 1042 aaKnown RBP20.3■□□□□ 0.84
TNFRSF1A-209ENST00000536717 GRIN2CQ14957 1233 aa20.3■□□□□ 0.84
TNFRSF1A-209ENST00000536717 UIMC1Q96RL1 719 aa20.3■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PCDHA4Q9UN74 947 aa20.3■□□□□ 0.84
TNFRSF1A-209ENST00000536717 RSPH10B2B2RC85 870 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 M0R2N6 131 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 DDX39AO00148 427 aaKnown RBP20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 IPO5O00410 1097 aaKnown RBP20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 DTNBO60941 627 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 RSPH10BP0C881 870 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 SETQ01105 290 aaPredicted RBP20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PPFIA1Q13136 1202 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CNKSR3Q6P9H4 555 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 MYLIPQ8WY64 445 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 LENG9Q96B70 501 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 SLC9A7Q96T83 725 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 MSRAQ9UJ68 235 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 A0A0C4DFX4 3053 aa20.29■□□□□ 0.84
TNFRSF1A-209ENST00000536717 IGKV6D-21A0A0A0MT36 114 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CTDNEP1O95476 244 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 MYOGP15173 224 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 GRIK4Q16099 956 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 DAGLBQ8NCG7 672 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 NKX2-4Q9H2Z4 354 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 AZI2Q9H6S1 392 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 LIMCH1Q9UPQ0 1083 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 STK36Q9NRP7 1315 aa20.28■□□□□ 0.84
TNFRSF1A-209ENST00000536717 MBLAC1A4D2B0 266 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CAND2O75155 1236 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CDKL5O76039 1030 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 LARGE1O95461 756 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 CTSHP09668 335 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 MCM2P49736 904 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 STAT5BP51692 787 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 WDR5P61964 334 aaKnown RBP20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 ME3Q16798 604 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PRR16Q569H4 304 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 MARCH8Q5T0T0 291 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 ABHD15Q6UXT9 468 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PLPPR4Q7Z2D5 763 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 BLIDQ8IZY5 108 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 FAM177A1Q8N128 213 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PHOSPHO2Q8TCD6 241 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 ZNF577Q9BSK1 485 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 OSBPL7Q9BZF2 842 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 PCDHA11Q9Y5I1 949 aa20.27■□□□□ 0.84
TNFRSF1A-209ENST00000536717 INSRRP14616 1297 aa20.27■□□□□ 0.83
TNFRSF1A-209ENST00000536717 USP11P51784 963 aa20.27■□□□□ 0.83
TNFRSF1A-209ENST00000536717 PLCB4Q15147 1175 aa20.27■□□□□ 0.83
TNFRSF1A-209ENST00000536717 RUFY4Q6ZNE9 571 aa20.27■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TBCKQ8TEA7 893 aa20.27■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TUBE1Q9UJT0 475 aa20.27■□□□□ 0.83
TNFRSF1A-209ENST00000536717 GALNT17Q6IS24 598 aa20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 RPAINQ86UA6 219 aa20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 CCDC60Q8IWA6 550 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 NECAB1Q8N987 351 aa20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 DBF4BQ8NFT6 615 aa20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 ZSCAN31Q96LW9 406 aaPredicted RBP20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TBC1D22BQ9NU19 505 aa20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 KCNJ14Q9UNX9 436 aa20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TRANK1O15050 2925 aa20.26■□□□□ 0.83
TNFRSF1A-209ENST00000536717 ABHD14A-ACY1A0A1B0GW23 586 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 KCNJ6P48051 423 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 IGBP1P78318 339 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 DEFB103AP81534 67 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 MKRN4PQ13434 485 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 PLEKHG4Q58EX7 1191 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 FAM26DQ5JW98 314 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TAF2Q6P1X5 1199 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 HERC6Q8IVU3 1022 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 GTF3C6Q969F1 213 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 ZBTB10Q96DT7 871 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 PHF20Q9BVI0 1012 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 SLC28A3Q9HAS3 691 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 GJB4Q9NTQ9 266 aa20.25■□□□□ 0.83
TNFRSF1A-209ENST00000536717 MSH4O15457 936 aa20.24■□□□□ 0.83
TNFRSF1A-209ENST00000536717 FDPSP14324 419 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1A-209ENST00000536717 IKBKEQ14164 716 aa20.24■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TMCO2Q7Z6W1 182 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TRPC6Q9Y210 931 aa20.24■□□□□ 0.83
TNFRSF1A-209ENST00000536717 POTEB3A0JP26 581 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 RRN3P2A6NIE6 340 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 CHRNA1P02708 482 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 FOSL2P15408 326 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 SLC26A2P50443 739 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 ZNF746Q6NUN9 644 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 POTEBQ6S5H4 581 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 TRAPPC12Q8WVT3 735 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 DNAJB3Q8WWF6 145 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 ZNF302Q9NR11 478 aa20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 SH2B1Q9NRF2 756 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 ORC3Q9UBD5 711 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1A-209ENST00000536717 REV3LO60673 3130 aa20.22■□□□□ 0.83
TNFRSF1A-209ENST00000536717 BACH1O14867 736 aa20.22■□□□□ 0.83
TNFRSF1A-209ENST00000536717 CD2BP2O95400 341 aaKnown RBP20.22■□□□□ 0.83
TNFRSF1A-209ENST00000536717 CA3P07451 260 aa20.22■□□□□ 0.83
TNFRSF1A-209ENST00000536717 ATP4AP20648 1035 aa20.22■□□□□ 0.83
TNFRSF1A-209ENST00000536717 MGAT3Q09327 533 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms