RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MRPS23Q9Y3D9 190 aaKnown RBP7.96□□□□□ -1.14
CLIP1-207ENST00000536634 EID1Q9Y6B2 187 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 EFCAB6Q5THR3 1501 aa7.96□□□□□ -1.14
CLIP1-207ENST00000536634 ARHGAP31Q2M1Z3 1444 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 ZSCAN22P10073 491 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-207ENST00000536634 FOXO4P98177 505 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 LCE4AQ5TA78 99 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 STEAP3Q658P3 488 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 ZNF772Q68DY9 489 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-207ENST00000536634 MILR1Q7Z6M3 343 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 AMIGO3Q86WK7 504 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 IFNL3Q8IZI9 196 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 JMYQ8N9B5 988 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 KISS1RQ969F8 398 aaPredicted RBP7.95□□□□□ -1.14
CLIP1-207ENST00000536634 DHRS4Q9BTZ2 278 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 EPB41L1Q9H4G0 881 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 MSH6P52701 1360 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 FGD6Q6ZV73 1430 aa7.95□□□□□ -1.14
CLIP1-207ENST00000536634 DIP2AQ14689 1571 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 AHDC1Q5TGY3 1603 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-207ENST00000536634 DGKIO75912 1065 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 PLA2G1BP04054 148 aaKnown RBP7.94□□□□□ -1.14
CLIP1-207ENST00000536634 C8BP07358 591 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 TSPY4P0CV99 314 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 TSPY10P0CW01 314 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 GRK2P25098 689 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 GRK3P35626 688 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 KIZQ2M2Z5 673 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 CCDC144BQ3MJ40 725 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 MEX3CQ5U5Q3 659 aaKnown RBP7.94□□□□□ -1.14
CLIP1-207ENST00000536634 SPOCD1Q6ZMY3 1216 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 B3GNT8Q7Z7M8 397 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 FAM26EQ8N5C1 309 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.94□□□□□ -1.142e-8■■■□□ 16.2
CLIP1-207ENST00000536634 CPA5Q8WXQ8 436 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 PWWP2AQ96N64 755 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 SYT3Q9BQG1 590 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 KRTAP17-1Q9BYP8 105 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 ZSWIM4Q9H7M6 989 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 ZNF652Q9Y2D9 606 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 FAN1Q9Y2M0 1017 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 SPATA31A6Q5VVP1 1343 aa7.94□□□□□ -1.14
CLIP1-207ENST00000536634 CHD2O14647 1828 aaKnown RBP7.94□□□□□ -1.14
CLIP1-207ENST00000536634 CDK12Q9NYV4 1490 aaPredicted RBP7.94□□□□□ -1.14
CLIP1-207ENST00000536634 TADA3O75528 432 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 AFF3P51826 1226 aaKnown RBP7.93□□□□□ -1.14
CLIP1-207ENST00000536634 CACNB2Q08289 660 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-207ENST00000536634 VMACQ2NL98 169 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 EMC4Q5J8M3 183 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 MIB1Q86YT6 1006 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 PIP4K2CQ8TBX8 421 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 THAP3Q8WTV1 239 aaPredicted RBP7.93□□□□□ -1.14
CLIP1-207ENST00000536634 PTPRN2Q92932 1015 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 IPO9Q96P70 1041 aaKnown RBP7.93□□□□□ -1.14
CLIP1-207ENST00000536634 RGS12O14924 1447 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 ADGRB3O60242 1522 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 DUOX2Q9NRD8 1548 aa7.93□□□□□ -1.14
CLIP1-207ENST00000536634 HGSO14964 777 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-207ENST00000536634 IDI1Q13907 227 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 NFE2L2Q16236 605 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 C2orf27AQ580R0 203 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 ETV3LQ6ZN32 361 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 MAMDC2Q7Z304 686 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-207ENST00000536634 ARRDC4Q8NCT1 418 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 NOX5Q96PH1 765 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 KCNJ15Q99712 375 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 PIF1Q9H611 641 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 IPPKQ9H8X2 491 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 PCDHB4Q9Y5E5 795 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 PTCH2Q9Y6C5 1203 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.92□□□□□ -1.14
CLIP1-207ENST00000536634 MYO5BQ9ULV0 1848 aa7.92□□□□□ -1.14
CLIP1-207ENST00000536634 TCRBV5S2A0A599 114 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 SOD2P04179 222 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 COL6A2P12110 1019 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 STAT5AP42229 794 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 HTRA3P83110 453 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 CHRNA2Q15822 529 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 TCERG1LQ5VWI1 586 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 DPH6Q7L8W6 267 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 DDX11Q96FC9 970 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 MYOTQ9UBF9 498 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 PCDHA8Q9Y5H6 950 aa7.91□□□□□ -1.14
CLIP1-207ENST00000536634 SETBP1Q9Y6X0 1596 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 KIF15Q9NS87 1388 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 AFF2P51816 1311 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 AQP7O14520 342 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 GABREP78334 506 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 KRTAP19-4Q3LI73 84 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 OTOP3Q7RTS5 596 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 FAM126BQ8IXS8 530 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 ZSWIM2Q8NEG5 633 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 FNIP1Q8TF40 1166 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 MRFAP1L1Q96HT8 127 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 ALG1Q9BT22 464 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 SLC6A20Q9NP91 592 aa7.9□□□□□ -1.14
CLIP1-207ENST00000536634 PMF1-BGLAPU3KQ54 211 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms