RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 STIM2Q9P246 746 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 TRIM10Q9UDY6 481 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 CSADQ9Y600 493 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 CAPN7Q9Y6W3 813 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 USP34Q70CQ2 3546 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 TNKSO95271 1327 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 SYNGAP1Q96PV0 1343 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 LOC102724159A0A0B4J2E5 919 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 GRID2IPA4D2P6 1211 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 GOLGA6L10A6NI86 522 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 SPDYE5A6NIY4 337 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 PDHXO00330 501 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 RHOBTB3O94955 611 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 CHRM1P11229 460 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-216ENST00000536548 CCNE1P24864 410 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 CASP1P29466 404 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 HNRNPH3P31942 346 aaKnown RBP8.57□□□□□ -1.04
CPSF7-216ENST00000536548 PHKA1P46020 1223 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 MTIF2P46199 727 aaKnown RBP8.57□□□□□ -1.04
CPSF7-216ENST00000536548 CDR1P51861 262 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 CTSWP56202 376 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 NLRP5P59047 1200 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 PPARAQ07869 468 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 TBC1D8BQ0IIM8 1120 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 SNAPC2Q13487 334 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 NEDD9Q14511 834 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 PWP2Q15269 919 aaKnown RBP8.57□□□□□ -1.04
CPSF7-216ENST00000536548 SEC23AQ15436 765 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 PKN1Q16512 942 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 CFAP221Q4G0U5 840 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 IQCA1Q86XH1 822 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 CREG2Q8IUH2 290 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 RNF10Q8N5U6 811 aaKnown RBP8.57□□□□□ -1.04
CPSF7-216ENST00000536548 VGLL2Q8N8G2 317 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 EIF1ADQ8N9N8 165 aaKnown RBP8.57□□□□□ -1.04
CPSF7-216ENST00000536548 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 P3H4Q92791 437 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 KAT2BQ92831 832 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 ZKSCAN4Q969J2 545 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-216ENST00000536548 ERGIC2Q96RQ1 377 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 OSBPL9Q96SU4 736 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 TUBGCP2Q9BSJ2 902 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 EDEM3Q9BZQ6 932 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 TTYH3Q9C0H2 523 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 TMEM39BQ9GZU3 492 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 SH2D4AQ9H788 454 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 DONSONQ9NYP3 566 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 MINPP1Q9UNW1 487 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
CPSF7-216ENST00000536548 PFASO15067 1338 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 ABCB11O95342 1321 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 FAM205AQ6ZU69 1335 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PIEZO1Q92508 2521 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 MACROD2A1Z1Q3 448 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 FAM205CA6NFA0 338 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 B4DLN1 442 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PDE2AO00408 941 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 LAD1O00515 517 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 CLGNO14967 610 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PJA2O43164 708 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PDE8AO60658 829 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 ZMYND10O75800 440 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PPP1R37O75864 691 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 LCA5LO95447 670 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 MYBL2P10244 700 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 CYP2C8P10632 490 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 FNTAP49354 379 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 RBM5P52756 815 aaKnown RBP eCLIP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 SMTNP53814 917 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 NAP1L1P55209 391 aaKnown RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 FCGRTP55899 365 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 FUT2Q10981 343 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC152Q4G0S7 254 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 COBLL1Q53SF7 1204 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 IFIT1BQ5T764 474 aaKnown RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PPP4R3AQ6IN85 833 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 TTI2Q6NXR4 508 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 LRIG3Q6UXM1 1119 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 PPP4R3CPQ6ZMV5 832 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 TMTC3Q6ZXV5 915 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 ALYREFQ86V81 257 aaKnown RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 IRF2BP1Q8IU81 584 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 GSPT2Q8IYD1 628 aaKnown RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 CSGALNACT2Q8N6G5 542 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 GIMAP8Q8ND71 665 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 RASSF8Q8NHQ8 419 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 STAMQ92783 540 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 P2RX5Q93086 422 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 ZSCAN10Q96SZ4 725 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 LRRC1Q9BTT6 524 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 IFIH1Q9BYX4 1025 aaKnown RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 CCSER1Q9C0I3 900 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.56□□□□□ -1.043e-8■■■□□ 15.8
CPSF7-216ENST00000536548 NUCKS1Q9H1E3 243 aaKnown RBP8.56□□□□□ -1.04
CPSF7-216ENST00000536548 C11orf49Q9H6J7 331 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 SH3GLB2Q9NR46 395 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 DISC1Q9NRI5 854 aa8.56□□□□□ -1.04
CPSF7-216ENST00000536548 JAG2Q9Y219 1238 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms