RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CALRP27797 417 aaKnown RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 PRKCIP41743 596 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 ABL2P42684 1182 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 NT5C2P49902 561 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 ALDH5A1P51649 535 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 DRG2P55039 364 aaKnown RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 NPEPPSP55786 919 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 DYNLL1P63167 89 aaKnown RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 AMPD3Q01432 767 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 EVX2Q03828 476 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 KLRC3Q07444 240 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 MYO1EQ12965 1108 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 BNIP1Q12981 228 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 PSMD2Q13200 908 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 NAA25Q14CX7 972 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 PPP1R7Q15435 360 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 IFI16Q16666 785 aaKnown RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 INF2Q27J81 1249 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 KIAA0753Q2KHM9 967 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 DUPD1Q68J44 220 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 ZDHHC24Q6UX98 284 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 ASRGL1Q7L266 308 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 IRF2BP2Q7Z5L9 587 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 CADPS2Q86UW7 1296 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 KIRREL3Q8IZU9 778 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 TPCN2Q8NHX9 752 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 TBC1D5Q92609 795 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 TAF4BQ92750 862 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 GPKOWQ92917 476 aaPredicted RBP eCLIP7.57□□□□□ -1.23e-7■■■■□ 21.6
CPSF7-215ENST00000536145 RNF25Q96BH1 459 aaPredicted RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 ANKRD27Q96NW4 1050 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 MTMR9Q96QG7 549 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 LUC7LQ9NQ29 371 aaKnown RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 NOP53Q9NZM5 478 aaKnown RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 PNMA2Q9UL42 364 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 NOC2LQ9Y3T9 749 aaKnown RBP7.57□□□□□ -1.2
CPSF7-215ENST00000536145 KIF13BQ9NQT8 1826 aa7.57□□□□□ -1.2
CPSF7-215ENST00000536145 CCDC194A0A1B0GVG4 234 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 FAM187AA6NFU0 413 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 KCNK3O14649 394 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 DDX3YO15523 660 aaKnown RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 CYTH3O43739 400 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 CEP104O60308 925 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 SNX3O60493 162 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 NMT2O60551 498 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 BUB1BO60566 1050 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 ATP2C2O75185 946 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 UBOX5O94941 541 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 SHBGP04278 402 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 IBSPP21815 317 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 CCND1P24385 295 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 KIF5BP33176 963 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 PTGIRP43119 386 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 ZNF131P52739 623 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 KCNJ2P63252 427 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 DHX9Q08211 1270 aaKnown RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 PLS1Q14651 629 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 CNGA2Q16280 664 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 ASIC2Q16515 512 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 KRT71Q3SY84 523 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 ZNF568Q3ZCX4 644 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 TDRD12Q587J7 1177 aaKnown RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 LMOD2Q6P5Q4 547 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 BTNL9Q6UXG8 535 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 TRPM8Q7Z2W7 1104 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 ZNF571Q7Z3V5 609 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 CPLX4Q7Z7G2 160 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 NT5DC3Q86UY8 548 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 HOOK3Q86VS8 718 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 GPIHBP1Q8IV16 184 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 MICAL1Q8TDZ2 1067 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 UBLCP1Q8WVY7 318 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 TCP11Q8WWU5 503 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 DNAJC19Q96DA6 116 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 THOC1Q96FV9 657 aaKnown RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 HES6Q96HZ4 224 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 SPAG5Q96R06 1193 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 MTFR1LQ9H019 292 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 DDX47Q9H0S4 455 aaKnown RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 NLRC4Q9NPP4 1024 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 ARHGEF3Q9NR81 526 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 ABCF3Q9NUQ8 709 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 BARHL2Q9NY43 387 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 PRKAG3Q9UGI9 489 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 CNOT7Q9UIV1 285 aaKnown RBP7.56□□□□□ -1.2
CPSF7-215ENST00000536145 INTUQ9ULD6 942 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 COL4A3BPQ9Y5P4 624 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 NUP98P52948 1817 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 MYH7BA7E2Y1 1941 aa7.56□□□□□ -1.2
CPSF7-215ENST00000536145 NCANO14594 1321 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 BAZ2AQ9UIF9 1905 aaKnown RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 FRMD3A2A2Y4 597 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-215ENST00000536145 USP17L12C9JPN9 530 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 USP17L21D6R901 530 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 TTI1O43156 1089 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 AHCYL1O43865 530 aa7.55□□□□□ -1.2
CPSF7-215ENST00000536145 CTNND1O60716 968 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms