RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 EPM2AIP1Q7L775 607 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-202ENST00000535906 KRT26Q7Z3Y9 468 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 KIAA1328Q86T90 577 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 GPIHBP1Q8IV16 184 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 ZC3H3Q8IXZ2 948 aaKnown RBP14.76□□□□□ -0.05
VPS33B-202ENST00000535906 HNRNPLLQ8WVV9 542 aaKnown RBP14.76□□□□□ -0.05
VPS33B-202ENST00000535906 SLC5A5Q92911 643 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 CCDC42Q96M95 316 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 FUT8Q9BYC5 575 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 DUSP10Q9Y6W6 482 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 GNA14O95837 355 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 MYBP10242 640 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 POLD1P28340 1107 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 PPP2R5CQ13362 524 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 EDRF1Q3B7T1 1238 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 TPH2Q8IWU9 490 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 JDP2Q8WYK2 163 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 JAKMIP2Q96AA8 810 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 DYDC2Q96IM9 177 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 TEPSINQ96N21 525 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 TAOK3Q9H2K8 898 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 MYO6Q9UM54 1294 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 ZNF536O15090 1300 aa14.76□□□□□ -0.05
VPS33B-202ENST00000535906 CTAGE15A4D2H0 777 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 CTAGE8P0CG41 777 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 ARP10275 920 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 TGFB2P61812 414 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 KNOP1Q1ED39 458 aaKnown RBP14.75□□□□□ -0.05
VPS33B-202ENST00000535906 LONRF2Q1L5Z9 754 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 RINT1Q6NUQ1 792 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 CTAGE6Q86UF2 777 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 CTAGE4Q8IX94 777 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 NEK11Q8NG66 645 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.75□□□□□ -0.05
VPS33B-202ENST00000535906 ATAD5Q96QE3 1844 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 SFI1A8K8P3 1242 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 ENC1O14682 589 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 KRT86O43790 486 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 NOL4O94818 638 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 PRPF6O94906 941 aaKnown RBP14.75□□□□□ -0.05
VPS33B-202ENST00000535906 IPO7O95373 1038 aaKnown RBP14.75□□□□□ -0.05
VPS33B-202ENST00000535906 NR2F2P24468 414 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 DGKZQ13574 1117 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 DALRD3Q5D0E6 543 aaKnown RBP14.75□□□□□ -0.05
VPS33B-202ENST00000535906 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 CRACR2AQ9BSW2 395 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 TUFT1Q9NNX1 390 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 TRAF3IP3Q9Y228 551 aa14.75□□□□□ -0.05
VPS33B-202ENST00000535906 NFKBIEO00221 500 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 GAS7O60861 476 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 ICAM1P05362 532 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 EIF4A3P38919 411 aaKnown RBP14.74□□□□□ -0.05
VPS33B-202ENST00000535906 APBA1Q02410 837 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 WRAP73Q9P2S5 460 aaPredicted RBP14.74□□□□□ -0.05
VPS33B-202ENST00000535906 CCPG1Q9ULG6 757 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 FER1L6Q2WGJ9 1857 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 RBBP6Q7Z6E9 1792 aaKnown RBP14.74□□□□□ -0.05
VPS33B-202ENST00000535906 CETN3O15182 167 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 PRELPP51888 382 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 KCNA1Q09470 495 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 SMC1AQ14683 1233 aaKnown RBP14.74□□□□□ -0.05
VPS33B-202ENST00000535906 PDXDC1Q6P996 788 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 TRAPPC11Q7Z392 1133 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 CACNA2D4Q7Z3S7 1137 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 PNKPQ96T60 521 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 ZNF577Q9BSK1 485 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 DEFB129Q9H1M3 183 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 EHMT1Q9H9B1 1298 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 NLRC4Q9NPP4 1024 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 COL20A1Q9P218 1284 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 HDAC6Q9UBN7 1215 aa14.74□□□□□ -0.05
VPS33B-202ENST00000535906 ASTN2O75129 1339 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 NFIBO00712 420 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 MAP2K7O14733 419 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 HSD17B4P51659 736 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 KIF11P52732 1056 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 VAV2P52735 878 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 C1orf186Q6ZWK4 172 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 KCTD17Q8N5Z5 321 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 PRPF38AQ8NAV1 312 aaKnown RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 EHBP1Q8NDI1 1231 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 EDEM3Q9BZQ6 932 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 UNC45AQ9H3U1 944 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 TBCAO75347 108 aaKnown RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 ERLIN1O75477 346 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 GCNT3O95395 438 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 ATP1A1P05023 1023 aaKnown RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 TUBBP07437 444 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 ZNF280AP59817 542 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 KCNH2Q12809 1159 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 TNIP1Q15025 636 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 SPA17Q15506 151 aa14.73□□□□□ -0.05
VPS33B-202ENST00000535906 BEND6Q5SZJ8 279 aaPredicted RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 PURBQ96QR8 312 aaKnown RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 LSM14BQ9BX40 385 aaKnown RBP14.73□□□□□ -0.05
VPS33B-202ENST00000535906 MACROD2A1Z1Q3 448 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 IPO5O00410 1097 aaKnown RBP14.72□□□□□ -0.05
VPS33B-202ENST00000535906 PDXKO00764 312 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 LCA5LO95447 670 aa14.72□□□□□ -0.05
VPS33B-202ENST00000535906 ITGB5P18084 799 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms