RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 RSPH3Q86UC2 560 aa23.56■■□□□ 1.36
LTBR-205ENST00000535739 JPH1Q9HDC5 661 aaPredicted RBP23.56■■□□□ 1.36
LTBR-205ENST00000535739 RIC8AQ9NPQ8 531 aa23.56■■□□□ 1.36
LTBR-205ENST00000535739 SLC9A2Q9UBY0 812 aa23.56■■□□□ 1.36
LTBR-205ENST00000535739 ATG2AQ2TAZ0 1938 aa23.56■■□□□ 1.36
LTBR-205ENST00000535739 KCNA5P22460 613 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 FUT2Q10981 343 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 RTN1Q16799 776 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 PTPROQ16827 1216 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 ADCK5Q3MIX3 580 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 RASEFQ8IZ41 740 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 IL17RAQ96F46 866 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 EPHX3Q9H6B9 360 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 CDY2AQ9Y6F7 541 aa23.55■■□□□ 1.36
LTBR-205ENST00000535739 V9GY48 417 aaPredicted RBP23.55■■□□□ 1.36
LTBR-205ENST00000535739 ZBTB43O43298 467 aa23.54■■□□□ 1.36
LTBR-205ENST00000535739 ARP10275 920 aa23.54■■□□□ 1.36
LTBR-205ENST00000535739 INSRRP14616 1297 aa23.54■■□□□ 1.36
LTBR-205ENST00000535739 FBXO47Q5MNV8 452 aa23.54■■□□□ 1.36
LTBR-205ENST00000535739 DHX32Q7L7V1 743 aaKnown RBP23.54■■□□□ 1.36
LTBR-205ENST00000535739 C1QTNF1Q9BXJ1 281 aa23.54■■□□□ 1.36
LTBR-205ENST00000535739 STXBP3O00186 592 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 ENPP3O14638 875 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 ADCY7P51828 1080 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 ACTR2P61160 394 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 LEXMQ3ZCV2 418 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 FIBCD1Q8N539 461 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.53■■□□□ 1.36
LTBR-205ENST00000535739 ANO3Q9BYT9 981 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 FAM49AQ9H0Q0 323 aaPredicted RBP23.53■■□□□ 1.36
LTBR-205ENST00000535739 AZI2Q9H6S1 392 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 TMEM260Q9NX78 707 aa23.53■■□□□ 1.36
LTBR-205ENST00000535739 RRN3P2A6NIE6 340 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 MRPS6P82932 125 aaKnown RBP23.52■■□□□ 1.36
LTBR-205ENST00000535739 ERICH6BQ5W0A0 696 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 PPP1R18Q6NYC8 613 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 TSHZ1Q6ZSZ6 1077 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 BANK1Q8NDB2 785 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 TRAPPC12Q8WVT3 735 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 KHSRPQ92945 711 aaKnown RBP eCLIP23.52■■□□□ 1.36
LTBR-205ENST00000535739 SDF4Q9BRK5 362 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 AGO3Q9H9G7 860 aaKnown RBP23.52■■□□□ 1.36
LTBR-205ENST00000535739 CD320Q9NPF0 282 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 FAM217BQ9NTX9 383 aaPredicted RBP23.52■■□□□ 1.36
LTBR-205ENST00000535739 TRPC6Q9Y210 931 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 NFASCO94856 1347 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 EVPLQ92817 2033 aa23.52■■□□□ 1.36
LTBR-205ENST00000535739 KLF18A0A0U1RQI7 1052 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 SMCO2A6NFE2 343 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 GOLGA8AA7E2F4 631 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 GOLGA8BA8MQT2 603 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 FOSP01100 380 aaPredicted RBP23.51■■□□□ 1.35
LTBR-205ENST00000535739 CDC27P30260 824 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 CTNNB1P35222 781 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 ITGB3BPQ13352 177 aaPredicted RBP23.51■■□□□ 1.35
LTBR-205ENST00000535739 PLCB4Q15147 1175 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 TSGA10IPQ3SY00 556 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 TIGD5Q53EQ6 642 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 CEP55Q53EZ4 464 aa23.51■■□□□ 1.35
LTBR-205ENST00000535739 AGO4Q9HCK5 861 aaKnown RBP23.51■■□□□ 1.35
LTBR-205ENST00000535739 C5orf42Q9H799 3197 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 LINC00271P0C7V0 271 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 CD52P31358 61 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 STAT5BP51692 787 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 TMEM62Q0P6H9 643 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 TCEAL5Q5H9L2 206 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 RC3H2Q9HBD1 1191 aaKnown RBP23.5■■□□□ 1.35
LTBR-205ENST00000535739 BARHL2Q9NY43 387 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 ADGRA3Q8IWK6 1321 aa23.5■■□□□ 1.35
LTBR-205ENST00000535739 MEIS1O00470 390 aa23.49■■□□□ 1.35
LTBR-205ENST00000535739 IL9P15248 144 aa23.49■■□□□ 1.35
LTBR-205ENST00000535739 SREBF1P36956 1147 aa23.49■■□□□ 1.35
LTBR-205ENST00000535739 CLK2P49760 499 aaKnown RBP23.49■■□□□ 1.35
LTBR-205ENST00000535739 IER5Q5VY09 327 aa23.49■■□□□ 1.35
LTBR-205ENST00000535739 PTCRAQ6ISU1 281 aaPredicted RBP23.49■■□□□ 1.35
LTBR-205ENST00000535739 CENPQQ7L2Z9 268 aaPredicted RBP23.49■■□□□ 1.35
LTBR-205ENST00000535739 PLPPR4Q7Z2D5 763 aa23.49■■□□□ 1.35
LTBR-205ENST00000535739 TEX2Q8IWB9 1127 aa23.49■■□□□ 1.35
LTBR-205ENST00000535739 LINC01599Q8WXQ3 324 aa23.49■■□□□ 1.35
LTBR-205ENST00000535739 NAP1L2Q9ULW6 460 aaPredicted RBP23.49■■□□□ 1.35
LTBR-205ENST00000535739 MYH9P35579 1960 aaKnown RBP23.49■■□□□ 1.35
LTBR-205ENST00000535739 KIAA1671Q9BY89 1806 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 C5orf67F2Z3F1 127 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 H3BQ06 376 aaPredicted RBP23.48■■□□□ 1.35
LTBR-205ENST00000535739 hCG_1984214I3L0E3 225 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 BMPR1AP36894 532 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 AP3B2Q13367 1082 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 KRT32Q14532 448 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 RTN4RL1Q86UN2 441 aaPredicted RBP23.48■■□□□ 1.35
LTBR-205ENST00000535739 FAM178BQ8IXR5 827 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 ZNF713Q8N859 430 aaPredicted RBP23.48■■□□□ 1.35
LTBR-205ENST00000535739 NEK9Q8TD19 979 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 TNPO1Q92973 898 aaKnown RBP23.48■■□□□ 1.35
LTBR-205ENST00000535739 ZNF689Q96CS4 500 aaPredicted RBP23.48■■□□□ 1.35
LTBR-205ENST00000535739 NSUN3Q9H649 340 aaKnown RBP23.48■■□□□ 1.35
LTBR-205ENST00000535739 PCDHA2Q9Y5H9 948 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 TRPV2Q9Y5S1 764 aa23.48■■□□□ 1.35
LTBR-205ENST00000535739 POTEB3A0JP26 581 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 M0QZ92 97 aa23.47■■□□□ 1.35
LTBR-205ENST00000535739 DDX39AO00148 427 aaKnown RBP23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms