RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 LINC01553A4QN01 128 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 RRN3P2A6NIE6 340 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 RBAK-RBAKDNI3L0D1 243 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 MEIS1O00470 390 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 ACTR2P61160 394 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 ERVK-21P61565 698 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 IGBP1P78318 339 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 JAKMIP3Q5VZ66 844 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 SPRED2Q7Z698 418 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 FBXL16Q8N461 479 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 C6orf50Q9HD87 102 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 MTUS1Q9ULD2 1270 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 TRPC6Q9Y210 931 aa18.45■□□□□ 0.54
CLSTN3-204ENST00000535313 MICAL3Q7RTP6 2002 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 ESYT2A0FGR8 921 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 MBLAC1A4D2B0 266 aaPredicted RBP18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 PRPF3O43395 683 aaKnown RBP18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 CHRNA1P02708 482 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 RPLP2P05387 115 aaKnown RBP18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 NEFLP07196 543 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 STAT5BP51692 787 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 ITGB3BPQ13352 177 aaPredicted RBP18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 AAK1Q2M2I8 961 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 KRT40Q6A162 431 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 MCTP2Q6DN12 878 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 NIPA1Q7RTP0 329 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 PLPPR4Q7Z2D5 763 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 GDPD5Q8WTR4 605 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 YME1L1Q96TA2 773 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 PCYT2Q99447 389 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 OSBPL7Q9BZF2 842 aa18.44■□□□□ 0.54
CLSTN3-204ENST00000535313 NID2Q14112 1375 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 LPXNO60711 386 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 GHRP10912 638 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 INSRRP14616 1297 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 GNA11P29992 359 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 HTRA4P83105 476 aaPredicted RBP18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 MARCH8Q5T0T0 291 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 PLA2G4DQ86XP0 818 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 REXO1Q8N1G1 1221 aaKnown RBP18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 DNAJB3Q8WWF6 145 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 TOP1MTQ969P6 601 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 AGXT2Q9BYV1 514 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 ZMYND12Q9H0C1 365 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 SUGCTQ9HAC7 445 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 LMCD1Q9NZU5 365 aa18.43■□□□□ 0.54
CLSTN3-204ENST00000535313 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 DDX39AO00148 427 aaKnown RBP18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 EPB41L2O43491 1005 aaKnown RBP18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 UPP2O95045 317 aa18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 CENPBP07199 599 aaPredicted RBP18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 SLC26A2P50443 739 aa18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 PLCB4Q15147 1175 aa18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 BICD2Q8TD16 824 aa18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 PHKBQ93100 1093 aa18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 FAM49AQ9H0Q0 323 aaPredicted RBP18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 COG5Q9UP83 839 aa18.42■□□□□ 0.54
CLSTN3-204ENST00000535313 POTEB3A0JP26 581 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 FAM86B1E9PN63 330 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 M0QZ92 97 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 BACH1O14867 736 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 CYP3A4P08684 503 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 FAM86B2P0C5J1 330 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 MRPS6P82932 125 aaKnown RBP18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 MGAT3Q09327 533 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 LPIN1Q14693 890 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 PKN1Q16512 942 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 IER5Q5VY09 327 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 FAM160B1Q5W0V3 765 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 POTEBQ6S5H4 581 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 FBXO22Q8NEZ5 403 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 CCDC148Q8NFR7 591 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 SP7Q8TDD2 431 aaPredicted RBP18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 ADAMTS19Q8TE59 1207 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 RNF26Q9BY78 433 aaPredicted RBP18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 CDY2AQ9Y6F7 541 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 REV3LO60673 3130 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 NCOR1O75376 2440 aa18.41■□□□□ 0.54
CLSTN3-204ENST00000535313 TNFRSF10AO00220 468 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 ATG7O95352 703 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 TFF2Q03403 129 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 FBXO47Q5MNV8 452 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 RUFY3Q7L099 469 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 SAMD11Q96NU1 681 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 C17orf80Q9BSJ5 609 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 ZNF577Q9BSK1 485 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 TCEAL9Q9UHQ7 104 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 PCDHA2Q9Y5H9 948 aa18.4■□□□□ 0.54
CLSTN3-204ENST00000535313 COL4A4P53420 1690 aaPredicted RBP18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 IPO5O00410 1097 aaKnown RBP18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 PPFIA3O75145 1194 aa18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 CCNE2O96020 404 aa18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 IFNAR1P17181 557 aa18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 PDIA3P30101 505 aaKnown RBP18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 EVCP57679 992 aa18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 CCT2P78371 535 aaKnown RBP18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 NTRK3Q16288 839 aa18.39■□□□□ 0.53
CLSTN3-204ENST00000535313 MIS18BP1Q6P0N0 1132 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms