RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 VAMP4O75379 141 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 C1QTNF9P0C862 333 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 BMP2P12643 396 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 TGM1P22735 817 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 PLCD1P51178 756 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 SHC2P98077 582 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 GDF6Q6KF10 455 aaPredicted RBP12.05□□□□□ -0.48
TNC-209ENST00000534839 FIBCD1Q8N539 461 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 PLPP7Q8NBV4 271 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 OSBPL3Q9H4L5 887 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 MYH1P12882 1939 aa12.05□□□□□ -0.48
TNC-209ENST00000534839 C2CD4DB7Z1M9 353 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 CIAO1O76071 339 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 CPT1AP50416 773 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 CHMP4BP1P59074 171 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 KIAA1211Q6ZU35 1233 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 TTC6Q86TZ1 520 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 CPXCR1Q8N123 301 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 VN1R2Q8NFZ6 395 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 XAGE2Q96GT9 111 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 S1PR5Q9H228 398 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 USP18Q9UMW8 372 aa12.04□□□□□ -0.48
TNC-209ENST00000534839 FANCMQ8IYD8 2048 aa12.03□□□□□ -0.48
TNC-209ENST00000534839 ASB14A6NK59 587 aa12.03□□□□□ -0.48
TNC-209ENST00000534839 KINO60870 393 aaKnown RBP12.03□□□□□ -0.48
TNC-209ENST00000534839 DUSP28Q4G0W2 176 aa12.03□□□□□ -0.48
TNC-209ENST00000534839 OXLD1Q5BKU9 147 aa12.03□□□□□ -0.48
TNC-209ENST00000534839 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
TNC-209ENST00000534839 PLAGL2Q9UPG8 496 aa12.03□□□□□ -0.48
TNC-209ENST00000534839 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
TNC-209ENST00000534839 SLC30A4O14863 429 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 SKIP12755 728 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 USP5P45974 858 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 GABPAQ06546 454 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 FAM83BQ5T0W9 1011 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 ZNF618Q5T7W0 954 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 N4BP2L1Q5TBK1 243 aaPredicted RBP12.02□□□□□ -0.49
TNC-209ENST00000534839 TMEM179Q6ZVK1 233 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 ATP8B4Q8TF62 1192 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 IL17RAQ96F46 866 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 APOL5Q9BWW9 433 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 ERVK-5Q9HDB9 667 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 PARD6AQ9NPB6 346 aa12.02□□□□□ -0.49
TNC-209ENST00000534839 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 SMG1Q96Q15 3661 aaKnown RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 PER2O15055 1255 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 SPINT1O43278 529 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 IL15P40933 162 aaPredicted RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 PTGIRP43119 386 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 MVPQ14764 893 aaKnown RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 SOWAHCQ53LP3 525 aaPredicted RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 UNQ6494/PRO21346Q6UXR6 183 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 PRR23BQ6ZRT6 265 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 OR6J1Q8NGC5 347 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 WNT8BQ93098 351 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 INSM2Q96T92 566 aaPredicted RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 IFIH1Q9BYX4 1025 aaKnown RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
TNC-209ENST00000534839 CDH22Q9UJ99 828 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 RWDD3Q9Y3V2 267 aa12.01□□□□□ -0.49
TNC-209ENST00000534839 MYO10Q9HD67 2058 aa12□□□□□ -0.49
TNC-209ENST00000534839 SRRM3A6NNA2 597 aaPredicted RBP12□□□□□ -0.49
TNC-209ENST00000534839 ATP2A1O14983 1001 aa12□□□□□ -0.49
TNC-209ENST00000534839 STAU1O95793 577 aaKnown RBP12□□□□□ -0.49
TNC-209ENST00000534839 ICA1Q05084 483 aa12□□□□□ -0.49
TNC-209ENST00000534839 TRIM71Q2Q1W2 868 aaKnown RBP12□□□□□ -0.49
TNC-209ENST00000534839 TRMT2AQ8IZ69 625 aaKnown RBP12□□□□□ -0.49
TNC-209ENST00000534839 SPPL3Q8TCT6 385 aa12□□□□□ -0.49
TNC-209ENST00000534839 CLP1Q92989 425 aaKnown RBP12□□□□□ -0.49
TNC-209ENST00000534839 CALR3Q96L12 384 aaKnown RBP12□□□□□ -0.49
TNC-209ENST00000534839 NEK1Q96PY6 1258 aa12□□□□□ -0.49
TNC-209ENST00000534839 TLE6Q9H808 572 aa12□□□□□ -0.49
TNC-209ENST00000534839 FBXO40Q9UH90 709 aa12□□□□□ -0.49
TNC-209ENST00000534839 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
TNC-209ENST00000534839 USP17L12C9JPN9 530 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 USP17L21D6R901 530 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 ITGB1P05556 798 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 CTSOP43234 321 aaPredicted RBP11.99□□□□□ -0.49
TNC-209ENST00000534839 PLEKHG4Q58EX7 1191 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 SYCE2Q6PIF2 218 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 SESTD1Q86VW0 696 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 SIX5Q8N196 739 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 DEPDC4Q8N2C3 294 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 CHST13Q8NET6 341 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 NETO1Q8TDF5 533 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 WDR11Q9BZH6 1224 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 VTA1Q9NP79 307 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 PA2G4Q9UQ80 394 aaKnown RBP11.99□□□□□ -0.49
TNC-209ENST00000534839 NBEAQ8NFP9 2946 aa11.99□□□□□ -0.49
TNC-209ENST00000534839 ADGRA3Q8IWK6 1321 aa11.98□□□□□ -0.49
TNC-209ENST00000534839 KPNA6O60684 536 aa11.98□□□□□ -0.49
TNC-209ENST00000534839 AKR1B1P15121 316 aa11.98□□□□□ -0.49
TNC-209ENST00000534839 ARID4AP29374 1257 aaPredicted RBP11.98□□□□□ -0.49
TNC-209ENST00000534839 MAP7D1Q3KQU3 841 aa11.98□□□□□ -0.49
TNC-209ENST00000534839 POF1BQ8WVV4 589 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms