RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 SHHQ15465 462 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 TRIM71Q2Q1W2 868 aaKnown RBP14.61□□□□□ -0.07
CCS-209ENST00000534763 LETM2Q2VYF4 491 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 LRCH2Q5VUJ6 765 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 GPR153Q6NV75 609 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 B3GNT9Q6UX72 402 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 DHX38Q92620 1227 aaKnown RBP14.61□□□□□ -0.07
CCS-209ENST00000534763 ATP6V0A1Q93050 837 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 TEKT3Q9BXF9 490 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 FOXP1Q9H334 677 aaPredicted RBP14.61□□□□□ -0.07
CCS-209ENST00000534763 KCNMB3Q9NPA1 279 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 MAFBQ9Y5Q3 323 aaPredicted RBP14.61□□□□□ -0.07
CCS-209ENST00000534763 UMODL1Q5DID0 1318 aa14.61□□□□□ -0.07
CCS-209ENST00000534763 MBLAC1A4D2B0 266 aaPredicted RBP14.6□□□□□ -0.07
CCS-209ENST00000534763 GAS7O60861 476 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 DTNBO60941 627 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 CD2BP2O95400 341 aaKnown RBP14.6□□□□□ -0.07
CCS-209ENST00000534763 CKBP12277 381 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 FXR1P51114 621 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCS-209ENST00000534763 JAK3P52333 1124 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 CCL23P55773 120 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 PPFIA1Q13136 1202 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 TMEM240Q5SV17 173 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 RASIP1Q5U651 963 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 TAF2Q6P1X5 1199 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 C16orf59Q7L2K0 433 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 PPP1R13LQ8WUF5 828 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 LMBR1Q8WVP7 490 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 ZNF302Q9NR11 478 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 SETD4Q9NVD3 440 aa14.6□□□□□ -0.07
CCS-209ENST00000534763 DDX39AO00148 427 aaKnown RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 BACH1O14867 736 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 TREHO43280 583 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 CCNT1O60563 726 aaKnown RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 ZNF200P98182 395 aaPredicted RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 ORC2Q13416 577 aaPredicted RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 PLCB4Q15147 1175 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 GRIK4Q16099 956 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 EARS2Q5JPH6 523 aaKnown RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 C9orf50Q5SZB4 431 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 LRRC8DQ7L1W4 858 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 CCDC60Q8IWA6 550 aaPredicted RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 SLFN12Q8IYM2 578 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 ATP8B4Q8TF62 1192 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 HERVK_113Q902F9 699 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.59□□□□□ -0.077e-9■■■■□ 23
CCS-209ENST00000534763 MTIF3Q9H2K0 278 aaKnown RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 DISC1Q9NRI5 854 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.59□□□□□ -0.07
CCS-209ENST00000534763 COL1A2P08123 1366 aa14.59□□□□□ -0.07
CCS-209ENST00000534763 POTEB3A0JP26 581 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 SLC37A4O43826 429 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 HBP1O60381 514 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 FGBP02675 491 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 CXCL10P02778 98 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 INSRRP14616 1297 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 U2AF2P26368 475 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCS-209ENST00000534763 MARK3P27448 753 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 PPP2R5CQ13362 524 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 MARCH8Q5T0T0 291 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 SWSAP1Q6NVH7 229 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 PDXDC2PQ6P474 469 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 POTEBQ6S5H4 581 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 BBXQ8WY36 941 aaPredicted RBP14.58□□□□□ -0.08
CCS-209ENST00000534763 VWCEQ96DN2 955 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 FAM167AQ96KS9 214 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 RNPC3Q96LT9 517 aaKnown RBP14.58□□□□□ -0.08
CCS-209ENST00000534763 PCDH10Q9P2E7 1040 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 TUBE1Q9UJT0 475 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 IGSF9BQ9UPX0 1349 aa14.58□□□□□ -0.08
CCS-209ENST00000534763 BAG4O95429 457 aaKnown RBP14.57□□□□□ -0.08
CCS-209ENST00000534763 TRAPPC10P48553 1259 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 SMAD3P84022 425 aaKnown RBP14.57□□□□□ -0.08
CCS-209ENST00000534763 CUL4AQ13619 759 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 ZNF484Q5JVG2 852 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 FAM26DQ5JW98 314 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 TRAF7Q6Q0C0 670 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 ZNF365Q70YC5 407 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 NOSTRINQ8IVI9 506 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 WNT8BQ93098 351 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 SCLYQ96I15 445 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 UNC45AQ9H3U1 944 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 CEP131Q9UPN4 1083 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 TRPC6Q9Y210 931 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 SAMM50Q9Y512 469 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
CCS-209ENST00000534763 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 RSPH10B2B2RC85 870 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 BAIAP3O94812 1187 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 RSPH10BP0C881 870 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 ACTN1P12814 892 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 THPOP40225 353 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 GUCY1B3Q02153 619 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 ZNF618Q5T7W0 954 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 FAM43BQ6ZT52 329 aaPredicted RBP14.56□□□□□ -0.08
CCS-209ENST00000534763 RSPH3Q86UC2 560 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 NME8Q8N427 588 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 HAS1Q92839 578 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 GABBR1Q9UBS5 961 aa14.56□□□□□ -0.08
CCS-209ENST00000534763 VAV3Q9UKW4 847 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms