RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TRAF6Q9Y4K3 522 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 CD2APQ9Y5K6 639 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 LRRFIP2Q9Y608 721 aaKnown RBP3.71□□□□□ -1.82
CSDE1-216ENST00000534389 CFAP74Q9C0B2 1584 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 PRAG1Q86YV5 1406 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 C7orf72A4D263 438 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 C22orf46C9J442 243 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ENPP3O14638 875 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 IRS4O14654 1257 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 GNAT1P11488 350 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 TRIM27P14373 513 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 GSPT1P15170 499 aaKnown RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 IBSPP21815 317 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 BCL6P41182 706 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 MAGEA9P43362 315 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ERVFC1P60507 584 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 CHAF1AQ13111 956 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 LSAMPQ13449 338 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 CUL4AQ13619 759 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ZSCAN26Q16670 478 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 KIZQ2M2Z5 673 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 TTC31Q49AM3 519 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 MAP9Q49MG5 647 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 HSF5Q4G112 596 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ADGRF1Q5T601 910 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ACBD5Q5T8D3 534 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 OLFML2BQ68BL8 750 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 MCTP2Q6DN12 878 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 TMEM132EQ6IEE7 984 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ZSCAN25Q6NSZ9 544 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 CEP68Q76N32 757 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC186Q7Z3E2 898 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 TICAM2Q86XR7 235 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 WFDC3Q8IUB2 231 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 SUGP1Q8IWZ8 645 aaKnown RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 NIM1KQ8IY84 436 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 TXLNBQ8N3L3 684 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 FAM184AQ8NB25 1140 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 CACTINQ8WUQ7 758 aaKnown RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 DDX11Q96FC9 970 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 JMJD8Q96S16 334 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 MMP19Q99542 508 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ZFYVE21Q9BQ24 234 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 MRPL4Q9BYD3 311 aaKnown RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ZSCAN16Q9H4T2 348 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 PDLIM7Q9NR12 457 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 MBNL3Q9NUK0 354 aaKnown RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 NUDT5Q9UKK9 219 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ADAMTS6Q9UKP5 1117 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 PLAAQ9Y263 795 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 RRP7AQ9Y3A4 280 aaKnown RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 PAXBP1Q9Y5B6 917 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 PCDHA9Q9Y5H5 950 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 KANK1Q14678 1352 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 RPAP1Q9BWH6 1393 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 UHRF1BP1LA0JNW5 1464 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ATP10AO60312 1499 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 POLA1P09884 1462 aaPredicted RBP3.7□□□□□ -1.82
CSDE1-216ENST00000534389 IQSEC2Q5JU85 1478 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 TRPM1Q7Z4N2 1603 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 YEATS2Q9ULM3 1422 aa3.7□□□□□ -1.82
CSDE1-216ENST00000534389 ABCC10Q5T3U5 1492 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SCAF11Q99590 1463 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ANKRD62A6NC57 917 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 FADS2P1A8MWK0 482 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 NUDT19A8MXV4 375 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 B4E1Z4 1266 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 EIF3CLB5ME19 914 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 FAM47E-STBD1D6RA91 191 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ANKRD65E5RJM6 399 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 H3BQF6 201 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 GOLIM4O00461 696 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 KRIT1O00522 736 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 NRDCO43847 1150 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 KIF1CO43896 1103 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 PSPNO60542 156 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 MAFKO60675 156 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 DGKIO75912 1065 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SEC31AO94979 1220 aaKnown RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 CRTAMO95727 393 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 MPOP05164 745 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 TPM3P06753 285 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 LCP1P13796 627 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 MX1P20591 662 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SCP2P22307 547 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 GRK2P25098 689 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 GRK3P35626 688 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 DNM2P50570 870 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 GALK1P51570 392 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 ZNF75DP51815 510 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 CORO7P57737 925 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 GPR85P60893 370 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 MAP2K1Q02750 393 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SPIRE1Q08AE8 756 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 TMEM62Q0P6H9 643 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 PAK1Q13153 545 aa3.69□□□□□ -1.82
CSDE1-216ENST00000534389 PABPC4Q13310 644 aaKnown RBP eCLIP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 CBX2Q14781 532 aaPredicted RBP3.69□□□□□ -1.82
CSDE1-216ENST00000534389 SNX17Q15036 470 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms