RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	CEP55	Q53EZ4	464 aa		27.73	■■■□□ 2.03
RELA-223	ENST00000534283	IL27	Q8NEV9	243 aa		27.73	■■■□□ 2.03
RELA-223	ENST00000534283	ANO3	Q9BYT9	981 aa		27.73	■■■□□ 2.03
RELA-223	ENST00000534283	AGO4	Q9HCK5	861 aa	Known RBP	27.73	■■■□□ 2.03
RELA-223	ENST00000534283	TMEM260	Q9NX78	707 aa		27.73	■■■□□ 2.03
RELA-223	ENST00000534283	TUBE1	Q9UJT0	475 aa		27.73	■■■□□ 2.03
RELA-223	ENST00000534283	INSRR	P14616	1297 aa		27.72	■■■□□ 2.03
RELA-223	ENST00000534283	CPA1	P15085	419 aa		27.72	■■■□□ 2.03
RELA-223	ENST00000534283	ADD1	P35611	737 aa	Known RBP	27.72	■■■□□ 2.03
RELA-223	ENST00000534283	SREBF1	P36956	1147 aa		27.72	■■■□□ 2.03
RELA-223	ENST00000534283	DNAJB3	Q8WWF6	145 aa		27.72	■■■□□ 2.03
RELA-223	ENST00000534283	ZBTB10	Q96DT7	871 aa		27.72	■■■□□ 2.03
RELA-223	ENST00000534283	ATG7	O95352	703 aa		27.71	■■■□□ 2.03
RELA-223	ENST00000534283	GHR	P10912	638 aa		27.71	■■■□□ 2.03
RELA-223	ENST00000534283	ACTR2	P61160	394 aa		27.71	■■■□□ 2.03
RELA-223	ENST00000534283	PLPPR4	Q7Z2D5	763 aa		27.71	■■■□□ 2.03
RELA-223	ENST00000534283	FBXO22	Q8NEZ5	403 aa		27.71	■■■□□ 2.03
RELA-223	ENST00000534283	RRN3P2	A6NIE6	340 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	UPP2	O95045	317 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	AP3B2	Q13367	1082 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	PFKFB3	Q16875	520 aa	Predicted RBP	27.7	■■■□□ 2.02
RELA-223	ENST00000534283	EPC2	Q52LR7	807 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	FBXO47	Q5MNV8	452 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	RSPH3	Q86UC2	560 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	CRYGN	Q8WXF5	182 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	YME1L1	Q96TA2	773 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	GLT8D2	Q9H1C3	349 aa		27.7	■■■□□ 2.02
RELA-223	ENST00000534283	ENPP3	O14638	875 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	ADAMTS3	O15072	1205 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	HSPA4	P34932	840 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	PLCB4	Q15147	1175 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	NIPA1	Q7RTP0	329 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	FBXL16	Q8N461	479 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	SAMD11	Q96NU1	681 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	SDF4	Q9BRK5	362 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	SNX14	Q9Y5W7	946 aa		27.69	■■■□□ 2.02
RELA-223	ENST00000534283	IGKV6D-21	A0A0A0MT36	114 aa		27.68	■■■□□ 2.02
RELA-223	ENST00000534283	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	27.68	■■■□□ 2.02
RELA-223	ENST00000534283	CCNE2	O96020	404 aa		27.68	■■■□□ 2.02
RELA-223	ENST00000534283	IGBP1	P78318	339 aa		27.68	■■■□□ 2.02
RELA-223	ENST00000534283	APOBR	Q0VD83	1088 aa		27.68	■■■□□ 2.02
RELA-223	ENST00000534283	AZI2	Q9H6S1	392 aa		27.68	■■■□□ 2.02
RELA-223	ENST00000534283	AGO3	Q9H9G7	860 aa	Known RBP	27.68	■■■□□ 2.02
RELA-223	ENST00000534283	CDY2A	Q9Y6F7	541 aa		27.68	■■■□□ 2.02
RELA-223	ENST00000534283	FAM86B1	E9PN63	330 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283	FAM86B2	P0C5J1	330 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283	LINC00271	P0C7V0	271 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283	STAT5B	P51692	787 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283	MRPS6	P82932	125 aa	Known RBP	27.67	■■■□□ 2.02
RELA-223	ENST00000534283	PKN1	Q16512	942 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283		Q6ZUG5	572 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283	MRPL38	Q96DV4	380 aa	Known RBP	27.67	■■■□□ 2.02
RELA-223	ENST00000534283	PCDHA2	Q9Y5H9	948 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283	DOCK5	Q9H7D0	1870 aa		27.67	■■■□□ 2.02
RELA-223	ENST00000534283	ESYT2	A0FGR8	921 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283		H3BNC9	293 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	DHX15	O43143	795 aa	Known RBP	27.66	■■■□□ 2.02
RELA-223	ENST00000534283	CYP3A4	P08684	503 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	SCG2	P13521	617 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	METAP2	P50579	478 aa	Known RBP eCLIP	27.66	■■■□□ 2.02
RELA-223	ENST00000534283	ABHD15	Q6UXT9	468 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	TMEM192	Q8IY95	271 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	TRAPPC12	Q8WVT3	735 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	BRF1	Q92994	677 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	IL17RA	Q96F46	866 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	JAKMIP1	Q96N16	626 aa	Known RBP	27.66	■■■□□ 2.02
RELA-223	ENST00000534283	AGXT2	Q9BYV1	514 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	RC3H2	Q9HBD1	1191 aa	Known RBP	27.66	■■■□□ 2.02
RELA-223	ENST00000534283	BDP1	A6H8Y1	2624 aa		27.66	■■■□□ 2.02
RELA-223	ENST00000534283	COL4A6	Q14031	1691 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	NID2	Q14112	1375 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	IGLV3-22	A0A075B6J6	115 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	CCDC196	A0A1B0GTZ2	297 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	RPLP2	P05387	115 aa	Known RBP	27.65	■■■□□ 2.02
RELA-223	ENST00000534283	JAKMIP3	Q5VZ66	844 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	TSHZ1	Q6ZSZ6	1077 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	ZMYND12	Q9H0C1	365 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	FAM49A	Q9H0Q0	323 aa	Predicted RBP	27.65	■■■□□ 2.02
RELA-223	ENST00000534283	TRPC6	Q9Y210	931 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	SQOR	Q9Y6N5	450 aa		27.65	■■■□□ 2.02
RELA-223	ENST00000534283	RTN4RL1	Q86UN2	441 aa	Predicted RBP	27.64	■■■□□ 2.02
RELA-223	ENST00000534283	CRIPAK	Q8N1N5	446 aa		27.64	■■■□□ 2.02
RELA-223	ENST00000534283	LINC01599	Q8WXQ3	324 aa		27.64	■■■□□ 2.02
RELA-223	ENST00000534283	NAP1L2	Q9ULW6	460 aa	Predicted RBP	27.64	■■■□□ 2.02
RELA-223	ENST00000534283	COL4A4	P53420	1690 aa	Predicted RBP	27.64	■■■□□ 2.02
RELA-223	ENST00000534283	POTEB3	A0JP26	581 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	PRPF3	O43395	683 aa	Known RBP	27.63	■■■□□ 2.01
RELA-223	ENST00000534283	SLC26A2	P50443	739 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	FGD1	P98174	961 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	GPM6B	Q13491	265 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	NTRK3	Q16288	839 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	IER5	Q5VY09	327 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	BLOC1S2	Q6QNY1	142 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	POTEB	Q6S5H4	581 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	TNPO1	Q92973	898 aa	Known RBP	27.63	■■■□□ 2.01
RELA-223	ENST00000534283	ZNF689	Q96CS4	500 aa	Predicted RBP	27.63	■■■□□ 2.01
RELA-223	ENST00000534283	UBE2Z	Q9H832	354 aa	Predicted RBP	27.63	■■■□□ 2.01
RELA-223	ENST00000534283	NCOR1	O75376	2440 aa		27.63	■■■□□ 2.01
RELA-223	ENST00000534283	MICAL3	Q7RTP6	2002 aa		27.62	■■■□□ 2.01
RELA-223	ENST00000534283	RPS6KB1	P23443	525 aa		27.62	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms