RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 GPM6BQ13491 265 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 UVSSAQ2YD98 709 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 PLEKHG4Q58EX7 1191 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 ARHGEF16Q5VV41 709 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 MFSD6Q6ZSS7 791 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 LUZP1Q86V48 1076 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 SERINC5Q86VE9 423 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 DHX37Q8IY37 1157 aaKnown RBP9.37□□□□□ -0.91
NEDD8-207ENST00000533242 BANK1Q8NDB2 785 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 DBF4BQ8NFT6 615 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 UBA5Q9GZZ9 404 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 NUP62CLQ9H1M0 184 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 NSUN3Q9H649 340 aaKnown RBP9.37□□□□□ -0.91
NEDD8-207ENST00000533242 NAP1L2Q9ULW6 460 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-207ENST00000533242 MYH15Q9Y2K3 1946 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 A0A087WWV3 80 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 NCK2O43639 380 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 PPFIA4O75335 1185 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 PTMAP06454 111 aaKnown RBP9.37□□□□□ -0.91
NEDD8-207ENST00000533242 GOLGA8HP0CJ92 632 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-207ENST00000533242 ZP2Q05996 745 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 TYRO3Q06418 890 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 CCDC178Q5BJE1 867 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 TCEAL5Q5H9L2 206 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 KCNV1Q6PIU1 500 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 DGKHQ86XP1 1220 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 TMEM192Q8IY95 271 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 MYOCDQ8IZQ8 938 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 FBXL18Q96ME1 805 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 SCAND2PQ9GZW5 306 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-207ENST00000533242 PXMP2Q9NR77 195 aa9.37□□□□□ -0.91
NEDD8-207ENST00000533242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-207ENST00000533242 H3BQ06 376 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-207ENST00000533242 H3BQV1 296 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 CAND2O75155 1236 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 NR3C2P08235 984 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 EIF2AK2P19525 551 aaKnown RBP9.36□□□□□ -0.91
NEDD8-207ENST00000533242 THPOP40225 353 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 HIC1Q14526 733 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 ASPRV1Q53RT3 343 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 FBXO11Q86XK2 927 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 ADHFE1Q8IWW8 467 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 ADGRF4Q8IZF3 695 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 SEPT8Q92599 483 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 USP28Q96RU2 1077 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 CPVLQ9H3G5 476 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 GOLPH3LQ9H4A5 285 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 RNF41Q9H4P4 317 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-207ENST00000533242 R3HCC1Q9Y3T6 440 aaKnown RBP9.36□□□□□ -0.91
NEDD8-207ENST00000533242 MUC6Q6W4X9 2439 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 MUC3AQ02505 3323 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 HMGB1P09429 215 aaKnown RBP9.36□□□□□ -0.91
NEDD8-207ENST00000533242 GHRHRQ02643 423 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 QRICH1Q2TAL8 776 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 CELF3Q5SZQ8 465 aaKnown RBP9.36□□□□□ -0.91
NEDD8-207ENST00000533242 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 ANKS1AQ92625 1134 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 ESR2Q92731 530 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 TOP1MTQ969P6 601 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 YME1L1Q96TA2 773 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 LMAN2LQ9H0V9 348 aa9.36□□□□□ -0.91
NEDD8-207ENST00000533242 C17orf102A2RUQ5 167 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 HOXC8P31273 242 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 HSD17B4P51659 736 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 MYSM1Q5VVJ2 828 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 RBM43Q6ZSC3 357 aaKnown RBP9.35□□□□□ -0.91
NEDD8-207ENST00000533242 RPAINQ86UA6 219 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 MB21D2Q8IYB1 491 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-207ENST00000533242 SAMD3Q8N6K7 520 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 PNMA1Q8ND90 353 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
NEDD8-207ENST00000533242 TNMDQ9H2S6 317 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 KCNF1Q9H3M0 494 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 CLSTN2Q9H4D0 955 aa9.35□□□□□ -0.91
NEDD8-207ENST00000533242 MAP3K20Q9NYL2 800 aaKnown RBP9.35□□□□□ -0.91
NEDD8-207ENST00000533242 DOCK5Q9H7D0 1870 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 CCDC192P0DO97 292 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 ANO6Q4KMQ2 910 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 BICD2Q8TD16 824 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 APBB2Q92870 758 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 ATP6V0A1Q93050 837 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 MFSD14AQ96MC6 490 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 SPATA33Q96N06 139 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 C16orf70Q9BSU1 422 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 KAT14Q9H8E8 782 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 SENP2Q9HC62 589 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 KIAA1671Q9BY89 1806 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 NEDD4P46934 1319 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 PRC1O43663 620 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 GGPS1O95749 300 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 RB1P06400 928 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 PDIA4P13667 645 aaKnown RBP9.34□□□□□ -0.91
NEDD8-207ENST00000533242 MCM5P33992 734 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 EVCP57679 992 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-207ENST00000533242 EP400NLQ6ZTU2 488 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 SPC24Q8NBT2 197 aa9.34□□□□□ -0.91
NEDD8-207ENST00000533242 ERCC4Q92889 916 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-207ENST00000533242 ZNF274Q96GC6 653 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms