RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 KCNH1O95259 989 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 WNT11O96014 354 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ITGAVP06756 1048 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 FESP07332 822 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 FUT4P22083 530 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ACTN2P35609 894 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 DPY19L1Q2PZI1 675 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 RALGPS1Q5JS13 557 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 CCDC122Q5T0U0 273 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 NAIF1Q69YI7 327 aaPredicted RBP6.22□□□□□ -1.41
CD44-236ENST00000533222 MICALCLQ6ZW33 695 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 TMPRSS7Q7RTY8 843 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 FAM114A1Q8IWE2 563 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 TP53INP2Q8IXH6 220 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ARHGEF39Q8N4T4 335 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ZNF655Q8N720 491 aaPredicted RBP6.22□□□□□ -1.41
CD44-236ENST00000533222 LRRN4CLQ8ND94 238 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ENOX1Q8TC92 643 aaKnown RBP6.22□□□□□ -1.41
CD44-236ENST00000533222 RBM17Q96I25 401 aaKnown RBP6.22□□□□□ -1.41
CD44-236ENST00000533222 FAM81BQ96LP2 452 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 TTC14Q96N46 770 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 IWS1Q96ST2 819 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 STK31Q9BXU1 1019 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 BHMT2Q9H2M3 363 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ZFP64Q9NPA5 681 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 PRR13Q9NZ81 148 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 RGL1Q9NZL6 768 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 HDAC6Q9UBN7 1215 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 PCSK1NQ9UHG2 260 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 DDX25Q9UHL0 483 aaKnown RBP6.22□□□□□ -1.41
CD44-236ENST00000533222 MCM8Q9UJA3 840 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 TCFL5Q9UL49 500 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 SSX2IPQ9Y2D8 614 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ZNF652Q9Y2D9 606 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 GPR55Q9Y2T6 319 aaPredicted RBP6.22□□□□□ -1.41
CD44-236ENST00000533222 GMEB1Q9Y692 573 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 PPIP5K1Q6PFW1 1433 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 SETD5Q9C0A6 1442 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 USP19O94966 1318 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 ELP1O95163 1332 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 PTPRCP08575 1304 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 CCDC88BA6NC98 1476 aa6.22□□□□□ -1.41
CD44-236ENST00000533222 GOLGA6L9A6NEM1 432 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 ENO4A6NNW6 628 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 STXBP3O00186 592 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 LIN7AO14910 233 aaPredicted RBP6.21□□□□□ -1.42
CD44-236ENST00000533222 CHUKO15111 745 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 KDM1AO60341 852 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 CLASP2O75122 1294 aaKnown RBP6.21□□□□□ -1.42
CD44-236ENST00000533222 NEBLO76041 1014 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 CD3EP07766 207 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 XBP1P17861 261 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 RASGRF1Q13972 1273 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 TRIM29Q14134 588 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 PLCL1Q15111 1095 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 PREPLQ4J6C6 727 aaPredicted RBP6.21□□□□□ -1.42
CD44-236ENST00000533222 CCDC92Q53HC0 331 aaPredicted RBP6.21□□□□□ -1.42
CD44-236ENST00000533222 RTP2Q5QGT7 225 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 SFMBT2Q5VUG0 894 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 NUGGCQ68CJ6 796 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 ISM2Q6H9L7 571 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 CCDC174Q6PII3 467 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 CCDC50Q8IVM0 306 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 CCAR1Q8IX12 1150 aaKnown RBP6.21□□□□□ -1.42
CD44-236ENST00000533222 DRC7Q8IY82 874 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 PEX5LQ8IYB4 626 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 ABI1Q8IZP0 508 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 AFAP1Q8N556 730 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 BVESQ8NE79 360 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 FAM81AQ8TBF8 368 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 FRS2Q8WU20 508 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 BTN2A2Q8WVV5 523 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 RTF1Q92541 710 aaKnown RBP6.21□□□□□ -1.42
CD44-236ENST00000533222 GOLGA1Q92805 767 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 NACC2Q96BF6 587 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 MRGPRX3Q96LB0 322 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 SLC12A9Q9BXP2 914 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 INO80BQ9C086 356 aaPredicted RBP6.21□□□□□ -1.42
CD44-236ENST00000533222 CCDC113Q9H0I3 377 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 COMMD8Q9NX08 183 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 SLAMF8Q9P0V8 285 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 EBF1Q9UH73 591 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 AKT3Q9Y243 479 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 EMC9Q9Y3B6 208 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 SOGA1O94964 1423 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 CNTLNQ9NXG0 1405 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 PLEKHH2Q8IVE3 1493 aa6.21□□□□□ -1.42
CD44-236ENST00000533222 MAPKBP1O60336 1514 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 CLIP1P30622 1438 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 AKNAQ7Z591 1439 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 A0A087WZG4 1122 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 A0A1W2PQU0 124 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 GOLGA8AA7E2F4 631 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 CHL1O00533 1208 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 RAB11FIP3O75154 756 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 PEX14O75381 377 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 WDHD1O75717 1129 aaPredicted RBP6.2□□□□□ -1.42
CD44-236ENST00000533222 ZNF205O95201 554 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 GSNP06396 782 aa6.2□□□□□ -1.42
CD44-236ENST00000533222 VAV1P15498 845 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms