RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 STAG2Q8N3U4 1231 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 DCLK2Q8N568 766 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 GPR20Q99678 358 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 C1orf115Q9H7X2 142 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CERS4Q9HA82 394 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CHST7Q9NS84 486 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 SAP30BPQ9UHR5 308 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 NPTXRO95502 500 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 HOXD10P28358 340 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 ZYXQ15942 572 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 NTRK3Q16288 839 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CERKLQ49MI3 558 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 UBXN11Q5T124 520 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 PKN3Q6P5Z2 889 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 EFHBQ8N7U6 833 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 KBTBD3Q8NAB2 608 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 DAGLBQ8NCG7 672 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 ARRDC4Q8NCT1 418 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 LMBR1Q8WVP7 490 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 KCNB2Q92953 911 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 PPP1R12CQ9BZL4 782 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 ADAMTS10Q9H324 1103 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 JMJD4Q9H9V9 463 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 PNMA3Q9UL41 463 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 ZMYM2Q9UBW7 1377 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 PRDM1O75626 825 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CT47B1P0C2W7 299 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 GSPT1P15170 499 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 ATP2A2P16615 1042 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 AOC1P19801 751 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 TNNI2P48788 182 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 TMEM31Q5JXX7 168 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 IQSEC1Q6DN90 963 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 TMEM130Q8N3G9 435 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 IGDCC4Q8TDY8 1250 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 TMEM47Q9BQJ4 181 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 MARCH5Q9NX47 278 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 PRR14LQ5THK1 2151 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 MYH11P35749 1972 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 ST18O60284 1047 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 GPR32O75388 356 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 SLC25A27O95847 323 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 ADRB1P08588 477 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 IFIT1P09914 478 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 PLCB3Q01970 1234 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 BAATQ14032 418 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 TTLL12Q14166 644 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 LY6KQ17RY6 165 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CLLU1OSQ5K130 101 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 PTCRAQ6ISU1 281 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 SLC9A7Q96T83 725 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 C1QTNF1Q9BXJ1 281 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 TSPYL2Q9H2G4 693 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 ARMT1Q9H993 441 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CNNM1Q9NRU3 951 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 CEP126Q9P2H0 1117 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 UNC13CQ8NB66 2214 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 NEDD4P46934 1319 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 HERC1Q15751 4861 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 HNRNPLP14866 589 aaKnown RBP eCLIP2.13□□□□□ -2.07
KNL1-211ENST00000533001 SNAP25P60880 206 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 SIGLEC14Q08ET2 396 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 G3BP1Q13283 466 aaKnown RBP eCLIP2.13□□□□□ -2.07
KNL1-211ENST00000533001 DUSP6Q16828 381 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 PSRC1Q6PGN9 363 aaPredicted RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 RAD9AQ99638 391 aa2.13□□□□□ -2.07
KNL1-211ENST00000533001 LAS1LQ9Y4W2 734 aaKnown RBP2.13□□□□□ -2.07
KNL1-211ENST00000533001 ANKRD12Q6UB98 2062 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 FGAP02671 866 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 EVCP57679 992 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 PTPN21Q16825 1174 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 SOWAHCQ53LP3 525 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 FBXO47Q5MNV8 452 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 ERMP1Q7Z2K6 904 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 TMEM150AQ86TG1 271 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 ENAHQ8N8S7 591 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 SMCR8Q8TEV9 937 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 KCNN1Q92952 543 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 HLA-CQ95604 372 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 MINDY3Q9H8M7 445 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 PRMT8Q9NR22 394 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 ABCF2Q9UG63 623 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 BARX2Q9UMQ3 279 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 SPATA31C2B4DYI2 1134 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 PIK3CDO00329 1044 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 GALR2O43603 387 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 MYO1BO43795 1136 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 RAG1P15918 1043 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 HOXA13P31271 388 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 NEXNQ0ZGT2 675 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 GNASQ5JWF2 1037 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 FBXL6Q8N531 539 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 KDF1Q8NAX2 398 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 RBBP8NLQ8NC74 664 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 GTF3C2Q8WUA4 911 aaPredicted RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 AFG1LQ8WV93 481 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 POLR3GLQ9BT43 218 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 RAVER2Q9HCJ3 691 aaKnown RBP2.12□□□□□ -2.07
KNL1-211ENST00000533001 MAD2L2Q9UI95 211 aa2.12□□□□□ -2.07
KNL1-211ENST00000533001 EMSYQ7Z589 1322 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms