RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 POLR3CQ9BUI4 534 aaPredicted RBP9.14□□□□□ -0.95
TRIM53BP-201ENST00000532912 MED4Q9NPJ6 270 aa9.14□□□□□ -0.95
TRIM53BP-201ENST00000532912 NENFQ9UMX5 172 aa9.14□□□□□ -0.95
TRIM53BP-201ENST00000532912 FAN1Q9Y2M0 1017 aa9.14□□□□□ -0.95
TRIM53BP-201ENST00000532912 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.14□□□□□ -0.95
TRIM53BP-201ENST00000532912 STK24Q9Y6E0 443 aa9.14□□□□□ -0.95
TRIM53BP-201ENST00000532912 ASTN1O14525 1302 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 EML1O00423 815 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 MEIS1O00470 390 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 PDXKO00764 312 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 CETN3O15182 167 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 NCK2O43639 380 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 GH2P01242 217 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 MYBP10242 640 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 BMP3P12645 472 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 NR2F2P24468 414 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 POLD1P28340 1107 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 GPS2Q13227 327 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 PABPC4Q13310 644 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 NAB2Q15742 525 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 EZH2Q15910 746 aaKnown RBP9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 SLC18A3Q16572 532 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 KNOP1Q1ED39 458 aaKnown RBP9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 MAP9Q49MG5 647 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 MUM1L1Q5H9M0 696 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 KIAA1755Q5JYT7 1200 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 TAF3Q5VWG9 929 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 IQCEQ6IPM2 695 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 TEX2Q8IWB9 1127 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 KCTD17Q8N5Z5 321 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 FLAD1Q8NFF5 587 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 ERMNQ8TAM6 284 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 CYP2W1Q8TAV3 490 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 CAGE1Q8TC20 777 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 HDAC7Q8WUI4 952 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 ZNF622Q969S3 477 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 ALS2CR12Q96Q35 445 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 CRACR2AQ9BSW2 395 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 BCAS3Q9H6U6 928 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 PLCB1Q9NQ66 1216 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 VPS18Q9P253 973 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 HDAC9Q9UKV0 1011 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 PRR12Q9ULL5 1215 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 DNM3Q9UQ16 869 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 PCDHGC5Q9Y5F6 944 aa9.13□□□□□ -0.95
TRIM53BP-201ENST00000532912 A0A087X0T9 212 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 YDJCA8MPS7 323 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 BTNL10A8MVZ5 291 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 RSPH10B2B2RC85 870 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 AGPSO00116 658 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 RAD21O60216 631 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 ZMYND10O75800 440 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 AKAP3O75969 853 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 EYA4O95677 639 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 FAM228BP0C875 321 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 RSPH10BP0C881 870 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 KLRC1P26715 233 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 TNFRSF8P28908 595 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 HNRNPH2P55795 449 aaKnown RBP9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 SLC15A2Q16348 729 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 USH1GQ495M9 461 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 TDRD12Q587J7 1177 aaKnown RBP9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 IRF2BP2Q7Z5L9 587 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 GSPT2Q8IYD1 628 aaKnown RBP9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 ANKRD13CQ8N6S4 541 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 BORCS6Q96GS4 357 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 PRMT6Q96LA8 375 aaPredicted RBP9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 DRC1Q96MC2 740 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 NOX5Q96PH1 765 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 HSD17B14Q9BPX1 270 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 LRRC1Q9BTT6 524 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 SELENOOQ9BVL4 669 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 RUSC1Q9BVN2 902 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 TMX4Q9H1E5 349 aaPredicted RBP9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 TDRD3Q9H7E2 651 aaKnown RBP9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 SIX2Q9NPC8 291 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 SMARCAL1Q9NZC9 954 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 EHD2Q9NZN4 543 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 DMGDHQ9UI17 866 aaKnown RBP9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 ATP8B3O60423 1300 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
TRIM53BP-201ENST00000532912 SLC16A3O15427 465 aaKnown RBP9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 BUB1O43683 1085 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 KRT18P05783 430 aaKnown RBP9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 HOXA13P31271 388 aaPredicted RBP9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 RBM5P52756 815 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 EPHA7Q15375 998 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 NFIL3Q16649 462 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 AOC3Q16853 763 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 RBM26Q5T8P6 1007 aaKnown RBP9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 OLIG1Q8TAK6 271 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 TBC1D5Q92609 795 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 FIZ1Q96SL8 496 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 EIF2AK1Q9BQI3 630 aaKnown RBP9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 PACSIN1Q9BY11 444 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 OLFML3Q9NRN5 406 aa9.11□□□□□ -0.95
TRIM53BP-201ENST00000532912 TYW1Q9NV66 732 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms