RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 LIG1P18858 919 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 PTMSP20962 102 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
COL16A1-217ENST00000532877 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
COL16A1-217ENST00000532877 NDUFA8P51970 172 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 CYP4A11Q02928 519 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 KARSQ15046 597 aaKnown RBP16.04■□□□□ 0.16
COL16A1-217ENST00000532877 ABHD15Q6UXT9 468 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 CCDC73Q6ZRK6 1079 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 PPTC7Q8NI37 304 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 NEK9Q8TD19 979 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 DYDC2Q96IM9 177 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 GPR20Q99678 358 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 KCNH3Q9ULD8 1083 aa16.04■□□□□ 0.16
COL16A1-217ENST00000532877 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 SLC26A4O43511 780 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 DUSP11O75319 330 aaKnown RBP16.03■□□□□ 0.16
COL16A1-217ENST00000532877 ATG7O95352 703 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 PSAPP07602 524 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 SPATA31C1P0DKV0 1188 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 RPA1P27694 616 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 TCF7P36402 384 aaPredicted RBP16.03■□□□□ 0.16
COL16A1-217ENST00000532877 FAM160A1Q05DH4 1040 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 GRB10Q13322 594 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
COL16A1-217ENST00000532877 HYIQ5T013 277 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 MIS18BP1Q6P0N0 1132 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 CATSPER3Q86XQ3 398 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 CCDC60Q8IWA6 550 aaPredicted RBP16.03■□□□□ 0.16
COL16A1-217ENST00000532877 PDILTQ8N807 584 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 BANK1Q8NDB2 785 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 AFG1LQ8WV93 481 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 SEPT1Q8WYJ6 367 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 DPF3Q92784 378 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 CALML4Q96GE6 196 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 HSD17B14Q9BPX1 270 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 LXNQ9BS40 222 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 POLR3CQ9BUI4 534 aaPredicted RBP16.03■□□□□ 0.16
COL16A1-217ENST00000532877 TUFT1Q9NNX1 390 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 RGL1Q9NZL6 768 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 Q9Y3F1 56 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 VCANP13611 3396 aa16.03■□□□□ 0.16
COL16A1-217ENST00000532877 MYH9P35579 1960 aaKnown RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 IGSF9BQ9UPX0 1349 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 DYNC1LI2O43237 492 aaPredicted RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 MBD3O95983 291 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 P4HBP07237 508 aaKnown RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 MMP3P08254 477 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 RARBP10826 455 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 PLCG1P19174 1290 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 SYKP43405 635 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 ECM1Q16610 540 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 UGCGQ16739 394 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 TMEM119Q4V9L6 283 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 POTEGQ6S5H5 508 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 FMR1NBQ8N0W7 255 aaPredicted RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 CDK5RAP3Q96JB5 506 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 PNMA5Q96PV4 448 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 PLIN2Q99541 437 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 HMX1Q9NP08 348 aaPredicted RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 WRAP73Q9P2S5 460 aaPredicted RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
COL16A1-217ENST00000532877 DDX20Q9UHI6 824 aaKnown RBP16.02■□□□□ 0.16
COL16A1-217ENST00000532877 SYNRGQ9UMZ2 1314 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 IGKV6D-21A0A0A0MT36 114 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 BACH1O14867 736 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 POLR2DO15514 142 aaKnown RBP16.01■□□□□ 0.15
COL16A1-217ENST00000532877 NR1I2O75469 434 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 SLITRK3O94933 977 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 HOXD8P13378 290 aaPredicted RBP16.01■□□□□ 0.15
COL16A1-217ENST00000532877 QARSP47897 775 aaKnown RBP16.01■□□□□ 0.15
COL16A1-217ENST00000532877 SNW1Q13573 536 aaKnown RBP16.01■□□□□ 0.15
COL16A1-217ENST00000532877 E2F4Q16254 413 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 SWSAP1Q6NVH7 229 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 TPH2Q8IWU9 490 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 LRRC15Q8TF66 581 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 LRCH3Q96II8 777 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 PCYT2Q99447 389 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 NT5C3AQ9H0P0 336 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 AP5M1Q9H0R1 490 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
COL16A1-217ENST00000532877 DDX19AQ9NUU7 478 aaKnown RBP16.01■□□□□ 0.15
COL16A1-217ENST00000532877 GABBR1Q9UBS5 961 aa16.01■□□□□ 0.15
COL16A1-217ENST00000532877 EMSYQ7Z589 1322 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 LOXHD1Q8IVV2 1947 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 A6NJR5 290 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 CTAGE5O15320 804 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 MSCO60682 206 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 LGR5O75473 907 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 MUTP22033 750 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 STAT6P42226 847 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 CPT1AP50416 773 aa16■□□□□ 0.15
COL16A1-217ENST00000532877 GJA9P57773 515 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms