RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 STK32BQ9NY57 414 aa6.25□□□□□ -1.41
PCF11-205ENST00000530906 NRBP1Q9UHY1 535 aa6.25□□□□□ -1.41
PCF11-205ENST00000530906 HERC5Q9UII4 1024 aaKnown RBP6.25□□□□□ -1.41
PCF11-205ENST00000530906 ITIH6Q6UXX5 1313 aa6.25□□□□□ -1.41
PCF11-205ENST00000530906 hCG_1642624A0A1W2PR95 340 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 BICDL2A1A5D9 508 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 H7C1D1 291 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 PSMA7O14818 248 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 ZBTB5O15062 677 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 ECE2O60344 883 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 SIN3BO75182 1162 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 RHOBTB3O94955 611 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 RPN1P04843 607 aaKnown RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 TNNT1P13805 278 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 EEF1GP26641 437 aaKnown RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 SHMT1P34896 483 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 GATA4P43694 442 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 LRMPQ12912 555 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 PAK1Q13153 545 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 TBX2Q13207 712 aaPredicted RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 AP3B2Q13367 1082 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 PTPN14Q15678 1187 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 SLC15A2Q16348 729 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 INF2Q27J81 1249 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 SLC35G1Q2M3R5 365 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 SPECC1Q5M775 1068 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 TATDN1Q6P1N9 297 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 USP49Q70CQ1 688 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 FAM114A1Q8IWE2 563 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 TNS4Q8IZW8 715 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 IGSF22Q8N9C0 903 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 GMCL1P1Q8NEA9 526 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 KIF18AQ8NI77 898 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 CUL5Q93034 780 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 ZNF622Q969S3 477 aaKnown RBP eCLIP6.24□□□□□ -1.41
PCF11-205ENST00000530906 CALML4Q96GE6 196 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 DHTKD1Q96HY7 919 aaPredicted RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 PANX2Q96RD6 677 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 PSMD1Q99460 953 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 KRTAP4-8Q9BYQ9 185 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 TMX1Q9H3N1 280 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 DDX4Q9NQI0 724 aaKnown RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 TMOD2Q9NZR1 351 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 LIMA1Q9UHB6 759 aaKnown RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 STARD13Q9Y3M8 1113 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.24□□□□□ -1.41
PCF11-205ENST00000530906 GPC6Q9Y625 555 aaPredicted RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 ARFGEF1Q9Y6D6 1849 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 BAZ2BQ9UIF8 2168 aaKnown RBP6.24□□□□□ -1.41
PCF11-205ENST00000530906 ABCB11O95342 1321 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 KDM3AQ9Y4C1 1321 aa6.24□□□□□ -1.41
PCF11-205ENST00000530906 SIPA1L1O43166 1804 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 SLX4Q8IY92 1834 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 KIF13BQ9NQT8 1826 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 A0A087X0B3 334 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 PVALEFA0A1B0GWK0 134 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 USP17L5A8MUK1 530 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 TBX3O15119 743 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 FOXN1O15353 648 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 CTIFO43310 598 aaKnown RBP6.23□□□□□ -1.41
PCF11-205ENST00000530906 FGFR1OPO95684 399 aaKnown RBP6.23□□□□□ -1.41
PCF11-205ENST00000530906 FOSP01100 380 aaPredicted RBP6.23□□□□□ -1.41
PCF11-205ENST00000530906 ATP1A3P13637 1013 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 AKR1B1P15121 316 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 AFMP43652 599 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 USP11P51784 963 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 SFSWAPQ12872 951 aaKnown RBP6.23□□□□□ -1.41
PCF11-205ENST00000530906 PICALMQ13492 652 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 NR1I3Q14994 352 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 CCDC93Q567U6 631 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 SH3PXD2AQ5TCZ1 1133 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 CEP135Q66GS9 1140 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 ARMCX5Q6P1M9 558 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 USP17L2Q6R6M4 530 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 CABP7Q86V35 215 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 CNGA4Q8IV77 575 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 RASSF8Q8NHQ8 419 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 PIGSQ96S52 555 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 SLC30A3Q99726 388 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 C7orf25Q9BPX7 421 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 SRRTQ9BXP5 876 aaKnown RBP6.23□□□□□ -1.41
PCF11-205ENST00000530906 NT5C3AQ9H0P0 336 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 SEMA6BQ9H3T3 888 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 THAP9Q9H5L6 903 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 ADD3Q9UEY8 706 aaKnown RBP6.23□□□□□ -1.41
PCF11-205ENST00000530906 HDAC9Q9UKV0 1011 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 PHLPP2Q6ZVD8 1323 aa6.23□□□□□ -1.41
PCF11-205ENST00000530906 CYP3A7-CYP3A51PA0A087WV96 503 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 A0A087WWV3 80 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 A0A1W2PQC6 194 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 AKR1B15C9JRZ8 316 aaPredicted RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 CCNT1O60563 726 aaKnown RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 PLA2G6O60733 806 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 KIF20AO95235 890 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 GOLGA8HP0CJ92 632 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 VEGFAP15692 232 aaPredicted RBP6.22□□□□□ -1.41
PCF11-205ENST00000530906 ALAS2P22557 587 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 CYP3A7P24462 503 aa6.22□□□□□ -1.41
PCF11-205ENST00000530906 PBX1P40424 430 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms