RNA–Protein interactions for RNA: ENST00000530820.5

CAPRIN1-209, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-209ENST00000530820 ZNF268Q14587 947 aaPredicted RBP9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 CDC37Q16543 378 aaPredicted RBP9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 CTC1Q2NKJ3 1217 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 ZFYVE27Q5T4F4 411 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 TYW1BQ6NUM6 668 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 FITM2Q8N6M3 262 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 SLC7A3Q8WY07 619 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 SNX27Q96L92 541 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 GRIP2Q9C0E4 1043 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 RETREG1Q9H6L5 497 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 RNPEPL1Q9HAU8 725 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 WWC3Q9ULE0 1092 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 CFAP74Q9C0B2 1584 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 CCDC141Q6ZP82 1450 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 SART1O43290 800 aaKnown RBP9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 MARCH6O60337 910 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 MGEA5O60502 916 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 DCTN3O75935 186 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 TPBGLP0DKB5 382 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 AMPHP49418 695 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 GRIN1Q05586 938 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 PDXDC1Q6P996 788 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 IYDQ6PHW0 289 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 CLEC4GQ6UXB4 293 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 IFT20Q8IY31 132 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 VMP1Q96GC9 406 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 CATSPER2Q96P56 530 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 AZI2Q9H6S1 392 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 SERTAD1Q9UHV2 236 aa9.56□□□□□ -0.88
CAPRIN1-209ENST00000530820 KATNA1O75449 491 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 TUBBP07437 444 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 COL6A1P12109 1028 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 CREB1P16220 341 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 KCNJ6P48051 423 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 FAM214AQ32MH5 1076 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 IZUMO2Q6UXV1 221 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 VPS52Q8N1B4 723 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 MYO1HQ8N1T3 1032 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 CENPKQ9BS16 269 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 KLHL4Q9C0H6 718 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 SENP6Q9GZR1 1112 aaPredicted RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 TMEM206Q9H813 350 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 DKK3Q9UBP4 350 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 ZRANB1Q9UGI0 708 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 STX8Q9UNK0 236 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 CTNND2Q9UQB3 1225 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 IGF1RP08069 1367 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 FGD5Q6ZNL6 1462 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 POLR1AO95602 1720 aaPredicted RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 RASA4BC9J798 803 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 RASA4O43374 803 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 YEATS4O95619 227 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 ADD1P35611 737 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 GJC1P36383 396 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 TRPC1P48995 793 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 CLK3P49761 638 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 SH3BGRP55822 239 aaPredicted RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 CAMK2BQ13554 666 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 KRT31Q15323 416 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 C21orf62-AS1Q17RA5 79 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 LIN52Q52LA3 116 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 RALYLQ86SE5 291 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 SLC38A6Q8IZM9 456 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 RIN3Q8TB24 985 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 STK32AQ8WU08 396 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 STMN2Q93045 179 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 DHTKD1Q96HY7 919 aaPredicted RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 PPP1R10Q96QC0 940 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 ATP13A3Q9H7F0 1226 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 ZSWIM6Q9HCJ5 1215 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 REXO2Q9Y3B8 237 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 PCDH11XQ9BZA7 1347 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 PCF11O94913 1555 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 HMGB1P1B2RPK0 211 aaPredicted RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 TNPO2O14787 897 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 KRT86O43790 486 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 TSPAN9O75954 239 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 LYNP07948 512 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 GEMIN4P57678 1058 aaKnown RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 ARHGAP4P98171 946 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 EHHADHQ08426 723 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 CPNE9Q8IYJ1 553 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 FBXO41Q8TF61 875 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 VTI1AQ96AJ9 217 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 CCDC42Q96M95 316 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 PLIN2Q99541 437 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 C2orf49Q9BVC5 232 aaPredicted RBP9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 PLB1Q6P1J6 1458 aa9.55□□□□□ -0.88
CAPRIN1-209ENST00000530820 UBE2Q2LH0YL09 131 aa9.54□□□□□ -0.88
CAPRIN1-209ENST00000530820 PEX11AO75192 247 aa9.54□□□□□ -0.88
CAPRIN1-209ENST00000530820 HOXD13P35453 343 aa9.54□□□□□ -0.88
CAPRIN1-209ENST00000530820 CYLC2Q14093 348 aaPredicted RBP9.54□□□□□ -0.88
CAPRIN1-209ENST00000530820 SF3B4Q15427 424 aaKnown RBP eCLIP9.54□□□□□ -0.885e-10■■■■□ 22.4
CAPRIN1-209ENST00000530820 C10orf62Q5T681 223 aaPredicted RBP9.54□□□□□ -0.88
CAPRIN1-209ENST00000530820 KLC3Q6P597 504 aa9.54□□□□□ -0.88
CAPRIN1-209ENST00000530820 USP49Q70CQ1 688 aa9.54□□□□□ -0.88
CAPRIN1-209ENST00000530820 FAM13CQ8NE31 585 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms