RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 ZNF215Q9UL58 517 aaPredicted RBP24.01■■□□□ 1.43
CAPN1-220ENST00000530567 MAFBQ9Y5Q3 323 aaPredicted RBP24.01■■□□□ 1.43
CAPN1-220ENST00000530567 BACH1O14867 736 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 BMP15O95972 392 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 ATP4AP20648 1035 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 MARK3P27448 753 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 TECP42680 631 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 STAT5BP51692 787 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 AZI2Q9H6S1 392 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 ZNF302Q9NR11 478 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 GABBR1Q9UBS5 961 aa24■■□□□ 1.43
CAPN1-220ENST00000530567 MYH9P35579 1960 aaKnown RBP23.99■■□□□ 1.43
CAPN1-220ENST00000530567 ZNF862O60290 1169 aa23.99■■□□□ 1.43
CAPN1-220ENST00000530567 NASPP49321 788 aaPredicted RBP23.99■■□□□ 1.43
CAPN1-220ENST00000530567 EPHA7Q15375 998 aa23.99■■□□□ 1.43
CAPN1-220ENST00000530567 FOXD4L6Q3SYB3 417 aaPredicted RBP23.99■■□□□ 1.43
CAPN1-220ENST00000530567 TRIM60Q495X7 471 aa23.99■■□□□ 1.43
CAPN1-220ENST00000530567 ARL6IP4Q66PJ3 421 aaKnown RBP23.99■■□□□ 1.43
CAPN1-220ENST00000530567 NFRKBQ6P4R8 1299 aa23.99■■□□□ 1.43
CAPN1-220ENST00000530567 FOXD4L3Q6VB84 417 aaPredicted RBP23.99■■□□□ 1.43
CAPN1-220ENST00000530567 SESTD1Q86VW0 696 aa23.99■■□□□ 1.43
CAPN1-220ENST00000530567 DAXXQ9UER7 740 aaPredicted RBP23.99■■□□□ 1.43
CAPN1-220ENST00000530567 RTP1P59025 263 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 CHMP4BP1P59074 171 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 CEBPZQ03701 1054 aaKnown RBP23.98■■□□□ 1.43
CAPN1-220ENST00000530567 HIC1Q14526 733 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 PLCB4Q15147 1175 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 FAM160B1Q5W0V3 765 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 PDXDC2PQ6P474 469 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 IGSF22Q8N9C0 903 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 CHAMP1Q96JM3 812 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 HDAC6Q9UBN7 1215 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 CEP131Q9UPN4 1083 aa23.98■■□□□ 1.43
CAPN1-220ENST00000530567 HOXC8P31273 242 aa23.97■■□□□ 1.43
CAPN1-220ENST00000530567 SLC26A2P50443 739 aa23.97■■□□□ 1.43
CAPN1-220ENST00000530567 NUCB2P80303 420 aa23.97■■□□□ 1.43
CAPN1-220ENST00000530567 DTHD1Q6ZMT9 781 aa23.97■■□□□ 1.43
CAPN1-220ENST00000530567 ANKRD33Q7Z3H0 272 aa23.97■■□□□ 1.43
CAPN1-220ENST00000530567 FAM126BQ8IXS8 530 aa23.97■■□□□ 1.43
CAPN1-220ENST00000530567 ZNF396Q96N95 335 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-220ENST00000530567 RGL1Q9NZL6 768 aa23.97■■□□□ 1.43
CAPN1-220ENST00000530567 WRAP73Q9P2S5 460 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-220ENST00000530567 TFIP11Q9UBB9 837 aaKnown RBP23.97■■□□□ 1.43
CAPN1-220ENST00000530567 MORC2Q9Y6X9 1032 aaPredicted RBP23.97■■□□□ 1.43
CAPN1-220ENST00000530567 SMIM10L2AP0DMW4 78 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 SMIM10L2BP0DMW5 78 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 DNM1Q05193 864 aaKnown RBP23.96■■□□□ 1.43
CAPN1-220ENST00000530567 TMEM266Q2M3C6 531 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 BANK1Q8NDB2 785 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 ATP8B4Q8TF62 1192 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 HSD17B14Q9BPX1 270 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 EIF2AK1Q9BQI3 630 aaKnown RBP23.96■■□□□ 1.43
CAPN1-220ENST00000530567 SEZ6LQ9BYH1 1024 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 GTF2IRD1Q9UHL9 959 aa23.96■■□□□ 1.43
CAPN1-220ENST00000530567 CIZ1Q9ULV3 898 aaPredicted RBP23.96■■□□□ 1.43
CAPN1-220ENST00000530567 STBD1O95210 358 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 TLE2Q04725 743 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 GRIN1Q05586 938 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 PTPN11Q06124 597 aaPredicted RBP23.95■■□□□ 1.42
CAPN1-220ENST00000530567 SLC39A14Q15043 492 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 FAM47CQ5HY64 1035 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 C7orf31Q8N865 590 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 LINC00301Q8NCQ3 95 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 ATP6V0A1Q93050 837 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 DYDC2Q96IM9 177 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 IPO9Q96P70 1041 aaKnown RBP23.95■■□□□ 1.42
CAPN1-220ENST00000530567 CTAGE1Q96RT6 745 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 ATP11BQ9Y2G3 1177 aa23.95■■□□□ 1.42
CAPN1-220ENST00000530567 VWA3AA6NCI4 1184 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 B4GALT4O60513 344 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 PQBP1O60828 265 aaKnown RBP23.94■■□□□ 1.42
CAPN1-220ENST00000530567 CD4P01730 458 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 P4HBP07237 508 aaKnown RBP23.94■■□□□ 1.42
CAPN1-220ENST00000530567 PRKCEQ02156 737 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 CYP4A11Q02928 519 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 PDIA5Q14554 519 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 GDF6Q6KF10 455 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-220ENST00000530567 TOX2Q96NM4 488 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 LXNQ9BS40 222 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 HTATIP2Q9BUP3 242 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 TRMT13Q9NUP7 481 aaKnown RBP23.94■■□□□ 1.42
CAPN1-220ENST00000530567 FBXO2Q9UK22 296 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-220ENST00000530567 TRIP12Q14669 1992 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-220ENST00000530567 MROH7Q68CQ1 1323 aa23.94■■□□□ 1.42
CAPN1-220ENST00000530567 POTEB3A0JP26 581 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 PP2D1A8MPX8 630 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 SLITRK3O94933 977 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 SPATA31C1P0DKV0 1188 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 MARCKSP29966 332 aaPredicted RBP23.93■■□□□ 1.42
CAPN1-220ENST00000530567 QARSP47897 775 aaKnown RBP23.93■■□□□ 1.42
CAPN1-220ENST00000530567 PSMC5P62195 406 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 ADAM17P78536 824 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 ATL3Q6DD88 541 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 POTEBQ6S5H4 581 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 TRPV6Q9H1D0 765 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 ZBTB42B2RXF5 422 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 YEATS4O95619 227 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 OATP04181 439 aa23.93■■□□□ 1.42
CAPN1-220ENST00000530567 ZNF200P98182 395 aaPredicted RBP23.93■■□□□ 1.42
CAPN1-220ENST00000530567 PPFIA1Q13136 1202 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms