RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 PRRT2Q7Z6L0 340 aaPredicted RBP6.98□□□□□ -1.29
USP47-209ENST00000530041 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
USP47-209ENST00000530041 KLHL36Q8N4N3 616 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 SMURF1Q9HCE7 757 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 KCND1Q9NSA2 647 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 RIC8BQ9NVN3 520 aa6.98□□□□□ -1.29
USP47-209ENST00000530041 K7ESM1 405 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 CLASP2O75122 1294 aaKnown RBP6.97□□□□□ -1.29
USP47-209ENST00000530041 KLHL18O94889 574 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 RASGRP1O95267 797 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 KNG1P01042 644 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 ITGB3P05106 788 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 GLRBP48167 497 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 EFEMP1Q12805 493 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 NFATC3Q12968 1075 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 BMS1Q14692 1282 aaKnown RBP6.97□□□□□ -1.29
USP47-209ENST00000530041 SURF1Q15526 300 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 PLEKHH3Q7Z736 793 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 STPG3Q8N7X2 389 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 SCLYQ96I15 445 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 DRC1Q96MC2 740 aa6.97□□□□□ -1.29
USP47-209ENST00000530041 RBM15Q96T37 977 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP47-209ENST00000530041 BARX1Q9HBU1 254 aaPredicted RBP6.97□□□□□ -1.29
USP47-209ENST00000530041 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.96□□□□□ -1.3
USP47-209ENST00000530041 IL18BPO95998 194 aa6.96□□□□□ -1.3
USP47-209ENST00000530041 SPATS1Q496A3 300 aa6.96□□□□□ -1.3
USP47-209ENST00000530041 HHIPL2Q6UWX4 724 aa6.96□□□□□ -1.3
USP47-209ENST00000530041 BRAPQ7Z569 592 aa6.96□□□□□ -1.3
USP47-209ENST00000530041 NUDT10Q8NFP7 164 aa6.96□□□□□ -1.3
USP47-209ENST00000530041 NUDT11Q96G61 164 aa6.96□□□□□ -1.3
USP47-209ENST00000530041 CELF4Q9BZC1 486 aaKnown RBP6.96□□□□□ -1.3
USP47-209ENST00000530041 NCOA5Q9HCD5 579 aaKnown RBP6.96□□□□□ -1.3
USP47-209ENST00000530041 SLC39A2Q9NP94 309 aa6.96□□□□□ -1.3
USP47-209ENST00000530041 KBTBD2Q8IY47 623 aa6.95□□□□□ -1.3
USP47-209ENST00000530041 CISD2Q8N5K1 135 aaKnown RBP6.95□□□□□ -1.3
USP47-209ENST00000530041 UBXN4Q92575 508 aa6.95□□□□□ -1.3
USP47-209ENST00000530041 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
USP47-209ENST00000530041 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
USP47-209ENST00000530041 COQ6Q9Y2Z9 468 aa6.95□□□□□ -1.3
USP47-209ENST00000530041 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 KCNK3O14649 394 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 PLD2O14939 933 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 NPTXRO95502 500 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 C4BPAP04003 597 aaKnown RBP6.94□□□□□ -1.3
USP47-209ENST00000530041 HERVK_113P62684 666 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 Q6ZUG5 572 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 OVCH1Q7RTY7 1134 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 FGD2Q7Z6J4 655 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 TACO1Q9BSH4 297 aaKnown RBP6.94□□□□□ -1.3
USP47-209ENST00000530041 ZSWIM4Q9H7M6 989 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 TRIM39Q9HCM9 518 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 ARHGAP28Q9P2N2 729 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 ZDHHC9Q9Y397 364 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 ZNF536O15090 1300 aa6.94□□□□□ -1.3
USP47-209ENST00000530041 H0Y858 1186 aa6.93□□□□□ -1.3
USP47-209ENST00000530041 LAMTOR5O43504 91 aa6.93□□□□□ -1.3
USP47-209ENST00000530041 KCNA6P17658 529 aa6.93□□□□□ -1.3
USP47-209ENST00000530041 DPP8Q6V1X1 898 aaPredicted RBP6.93□□□□□ -1.3
USP47-209ENST00000530041 NOSTRINQ8IVI9 506 aa6.93□□□□□ -1.3
USP47-209ENST00000530041 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
USP47-209ENST00000530041 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
USP47-209ENST00000530041 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 PTGS1P23219 599 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 AOAHP28039 575 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 PPP2CBP62714 309 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 PPP2CAP67775 309 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 NFKB2Q00653 900 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 ZNF827Q17R98 1081 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 CCDC144BQ3MJ40 725 aa6.92□□□□□ -1.3
USP47-209ENST00000530041 FNDC3BQ53EP0 1204 aaKnown RBP6.92□□□□□ -1.3
USP47-209ENST00000530041 SSBP3Q9BWW4 388 aaPredicted RBP6.92□□□□□ -1.3
USP47-209ENST00000530041 B4GALT4O60513 344 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 RAPGEF3O95398 923 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 ADRB1P08588 477 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 EPHB4P54760 987 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 SQSTM1Q13501 440 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 SEC23AQ15436 765 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 CPZQ66K79 652 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 ABHD17CQ6PCB6 329 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 GLB1LQ6UWU2 654 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 ARHGEF18Q6ZSZ5 1173 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 REXO1L1PQ8IX06 675 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 CLUHP3Q96NS8 147 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 SAMD11Q96NU1 681 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 KATNBL1Q9H079 304 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 INCENPQ9NQS7 918 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 PPP4R1LQ9P1A2 415 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 BTBD7Q9P203 1132 aa6.91□□□□□ -1.3
USP47-209ENST00000530041 SCDO00767 359 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 MAGEA10P43363 369 aaPredicted RBP6.9□□□□□ -1.3
USP47-209ENST00000530041 KRTAP10-2P60368 255 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 TMEM177Q53S58 311 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 RALYLQ86SE5 291 aaKnown RBP6.9□□□□□ -1.3
USP47-209ENST00000530041 TTC9BQ8N6N2 239 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 IGSF22Q8N9C0 903 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 SH3TC2Q8TF17 1288 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 KCNH7Q9NS40 1196 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 SMPD4Q9NXE4 827 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 GALNT8Q9NY28 637 aa6.9□□□□□ -1.3
USP47-209ENST00000530041 SLC12A8A0AV02 714 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms