RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 RRP36Q96EU6 259 aaKnown RBP18.49■□□□□ 0.55
COL16A1-216ENST00000529928 ALG13Q9NP73 1137 aaKnown RBP18.49■□□□□ 0.55
COL16A1-216ENST00000529928 CDY2AQ9Y6F7 541 aa18.49■□□□□ 0.55
COL16A1-216ENST00000529928 MEIS2O14770 477 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 CSPG5O95196 566 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 MARK3P27448 753 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 CAMK1Q14012 370 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 CMTR2Q8IYT2 770 aaKnown RBP18.48■□□□□ 0.55
COL16A1-216ENST00000529928 NCOA7Q8NI08 942 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 EDAQ92838 391 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 GLG1Q92896 1179 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 MSLNLQ96KJ4 702 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 SPZ1Q9BXG8 430 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 FTHL17Q9BXU8 183 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 SMARCAD1Q9H4L7 1026 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 SEC63Q9UGP8 760 aaKnown RBP18.48■□□□□ 0.55
COL16A1-216ENST00000529928 SQORQ9Y6N5 450 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 TTC3P53804 2025 aa18.48■□□□□ 0.55
COL16A1-216ENST00000529928 ZNF318Q5VUA4 2279 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 ATP9AO75110 1047 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 EYA4O95677 639 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 IGHDP01880 384 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 KCNA2P16389 499 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 MRPS6P82932 125 aaKnown RBP18.47■□□□□ 0.55
COL16A1-216ENST00000529928 MARCH8Q5T0T0 291 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 IER5Q5VY09 327 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 NPAS4Q8IUM7 802 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 MAP3K14Q99558 947 aa18.47■□□□□ 0.55
COL16A1-216ENST00000529928 MRPL42Q9Y6G3 142 aaKnown RBP18.47■□□□□ 0.55
COL16A1-216ENST00000529928 GSTTP1A0A1W2PQM5 241 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 RRN3P2A6NIE6 340 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 E7EWF7 191 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 ITGB1P05556 798 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 CD52P31358 61 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 KIF5BP33176 963 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 BMP8AQ7Z5Y6 402 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 CRIPAKQ8N1N5 446 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 CTCFLQ8NI51 663 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-216ENST00000529928 RUFY2Q8WXA3 655 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 LINC01599Q8WXQ3 324 aa18.46■□□□□ 0.55
COL16A1-216ENST00000529928 AGO3Q9H9G7 860 aaKnown RBP18.46■□□□□ 0.55
COL16A1-216ENST00000529928 M0QZ92 97 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 STAG3L1P0CL83 205 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 DNAJB1P25685 340 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 IGBP1P78318 339 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 MTMR1Q13613 665 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 EFHBQ8N7U6 833 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 SMRP1Q8NCR6 262 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 EXOC6Q8TAG9 804 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 SPPL3Q8TCT6 385 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 IGDCC4Q8TDY8 1250 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 TNPO1Q92973 898 aaKnown RBP18.45■□□□□ 0.54
COL16A1-216ENST00000529928 LZTS2Q9BRK4 669 aa18.45■□□□□ 0.54
COL16A1-216ENST00000529928 C5orf42Q9H799 3197 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 MAFGO15525 162 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 DDAH1O94760 285 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 ITGB5P18084 799 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 COASYQ13057 564 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 PKN1Q16512 942 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 TRIM67Q6ZTA4 783 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 ADGRD2Q7Z7M1 963 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 RTN4RL1Q86UN2 441 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-216ENST00000529928 ZNF654Q8IZM8 581 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 KLHL23Q8NBE8 558 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 PRRX2Q99811 253 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 FAM49AQ9H0Q0 323 aaPredicted RBP18.44■□□□□ 0.54
COL16A1-216ENST00000529928 PSTPIP2Q9H939 334 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 CLEC1BQ9P126 229 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 WDFY4Q6ZS81 3184 aa18.44■□□□□ 0.54
COL16A1-216ENST00000529928 SCG2P13521 617 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 INSRRP14616 1297 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 NRIP1P48552 1158 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 GNAQP50148 359 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 ANTXR2P58335 489 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 PTH1RQ03431 593 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 PAK2Q13177 524 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 PAN2Q504Q3 1202 aaKnown RBP18.43■□□□□ 0.54
COL16A1-216ENST00000529928 POF1BQ8WVV4 589 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 PBXIP1Q96AQ6 731 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 AZI2Q9H6S1 392 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 PKD2L1Q9P0L9 805 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 PADI3Q9ULW8 664 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 TRPV2Q9Y5S1 764 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 UBIAD1Q9Y5Z9 338 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 TAF6LQ9Y6J9 622 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 IGSF9BQ9UPX0 1349 aa18.43■□□□□ 0.54
COL16A1-216ENST00000529928 TECTAO75443 2155 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 KIAA1671Q9BY89 1806 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 TMEM221A6NGB7 291 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 SPDYE3A6NKU9 549 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 LOC730098B7Z3J9 87 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 M0R296 226 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 PTPN5P54829 565 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 FAM43BQ6ZT52 329 aaPredicted RBP18.42■□□□□ 0.54
COL16A1-216ENST00000529928 SUGP1Q8IWZ8 645 aaKnown RBP18.42■□□□□ 0.54
COL16A1-216ENST00000529928 MYL10Q9BUA6 226 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 JPH1Q9HDC5 661 aaPredicted RBP18.42■□□□□ 0.54
COL16A1-216ENST00000529928 JADE2Q9NQC1 790 aa18.42■□□□□ 0.54
COL16A1-216ENST00000529928 LRFN2Q9ULH4 789 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms