RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 FOXP2O15409 715 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 ALDH1L1O75891 902 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 C4BPAP04003 597 aaKnown RBP5.33□□□□□ -1.56
SVIP-203ENST00000529848 FAHP16930 419 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 TERF2Q15554 542 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 GPR158Q5T848 1215 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 SYDE2Q5VT97 1194 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 ETV3LQ6ZN32 361 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 TMC6Q7Z403 805 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 FAM126BQ8IXS8 530 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 DDX11Q96FC9 970 aa5.33□□□□□ -1.56
SVIP-203ENST00000529848 TOE1Q96GM8 510 aaKnown RBP5.33□□□□□ -1.56
SVIP-203ENST00000529848 PTX3P26022 381 aaPredicted RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 HERVK_113P62684 666 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 YBX1P67809 324 aaKnown RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 SMAD3P84022 425 aaKnown RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 TTF1Q15361 905 aaPredicted RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 SEC23AQ15436 765 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 SMAD2Q15796 467 aaKnown RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 ZC3H18Q86VM9 953 aaKnown RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 RASSF3Q86WH2 238 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 AMIGO3Q86WK7 504 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 NME9Q86XW9 330 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 ZNF610Q8N9Z0 462 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 HIPK4Q8NE63 616 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 FAM168AQ92567 244 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 ERCC4Q92889 916 aaPredicted RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 MENTQ9BUN1 341 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 TRIM8Q9BZR9 551 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 PDGFDQ9GZP0 370 aaPredicted RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 CCDC8Q9H0W5 538 aaPredicted RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 BCAS3Q9H6U6 928 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 NGRNQ9NPE2 291 aaKnown RBP5.32□□□□□ -1.56
SVIP-203ENST00000529848 TCEAL9Q9UHQ7 104 aa5.32□□□□□ -1.56
SVIP-203ENST00000529848 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.31□□□□□ -1.56
SVIP-203ENST00000529848 ACOT7O00154 380 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 HRKO00198 91 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 MARCH6O60337 910 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 MMEP08473 750 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 NEK2P51955 445 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 EPHB1P54762 984 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 ZNF200P98182 395 aaPredicted RBP5.31□□□□□ -1.56
SVIP-203ENST00000529848 ADCY1Q08828 1119 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 LRRC32Q14392 662 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 EPHA7Q15375 998 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 CATSPEREQ5SY80 951 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 ESRP1Q6NXG1 681 aaKnown RBP5.31□□□□□ -1.56
SVIP-203ENST00000529848 FRMD7Q6ZUT3 714 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 ZNF605Q86T29 641 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 MIB1Q86YT6 1006 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 E2F7Q96AV8 911 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 GBP4Q96PP9 640 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 ZDHHC5Q9C0B5 715 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 ZNF552Q9H707 407 aaPredicted RBP5.31□□□□□ -1.56
SVIP-203ENST00000529848 ZMAT4Q9H898 229 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 VTA1Q9NP79 307 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 C14orf119Q9NWQ9 140 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 ARHGAP28Q9P2N2 729 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 SPEF1Q9Y4P9 236 aa5.31□□□□□ -1.56
SVIP-203ENST00000529848 UBA6A0AVT1 1052 aaPredicted RBP5.3□□□□□ -1.56
SVIP-203ENST00000529848 K7ESF4 209 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 KDM1AO60341 852 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 FBXO21O94952 628 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 PAPLNO95428 1278 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 JUNBP17275 347 aaPredicted RBP5.3□□□□□ -1.56
SVIP-203ENST00000529848 VIPR1P32241 457 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 STAT5AP42229 794 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 NKX3-2P78367 333 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 SRSF3P84103 164 aaKnown RBP5.3□□□□□ -1.56
SVIP-203ENST00000529848 KLF1Q13351 362 aaPredicted RBP5.3□□□□□ -1.56
SVIP-203ENST00000529848 ABCB5Q2M3G0 1257 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 TEPPQ6URK8 271 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 ZBTB46Q86UZ6 589 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 C7orf31Q8N865 590 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 ASB15Q8WXK1 588 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 RTF1Q92541 710 aaKnown RBP5.3□□□□□ -1.56
SVIP-203ENST00000529848 C16orf92Q96LL3 132 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 USP36Q9P275 1121 aaKnown RBP5.3□□□□□ -1.56
SVIP-203ENST00000529848 KCNG1Q9UIX4 513 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 MSRAQ9UJ68 235 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 ASB1Q9Y576 335 aa5.3□□□□□ -1.56
SVIP-203ENST00000529848 PRAMEF22A3QJZ6 481 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 RASSF10A6NK89 507 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 GOLGA8AA7E2F4 631 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 GOLGA8BA8MQT2 603 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 GABRDO14764 452 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 MT-CO1P00395 513 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 LRG1P02750 347 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 ENO2P09104 434 aaPredicted RBP5.29□□□□□ -1.56
SVIP-203ENST00000529848 MYBL2P10244 700 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 NCAM1P13591 858 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 AOAHP28039 575 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 IRAK1P51617 712 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 SCAND1P57086 179 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 ERVK-21P61565 698 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 DBPQ10586 325 aaPredicted RBP5.29□□□□□ -1.56
SVIP-203ENST00000529848 PTPN21Q16825 1174 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 PRAMEF18Q5VWM3 479 aa5.29□□□□□ -1.56
SVIP-203ENST00000529848 CD276Q5ZPR3 534 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms