RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 IER5Q5VY09 327 aa20.21■□□□□ 0.83
CMTM1-213ENST00000529506 FAM117BQ6P1L5 589 aa20.21■□□□□ 0.83
CMTM1-213ENST00000529506 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.21■□□□□ 0.83
CMTM1-213ENST00000529506 CYP2W1Q8TAV3 490 aa20.21■□□□□ 0.83
CMTM1-213ENST00000529506 TOP1MTQ969P6 601 aa20.21■□□□□ 0.83
CMTM1-213ENST00000529506 SAMD11Q96NU1 681 aa20.21■□□□□ 0.83
CMTM1-213ENST00000529506 IFIH1Q9BYX4 1025 aaKnown RBP20.21■□□□□ 0.83
CMTM1-213ENST00000529506 AGO4Q9HCK5 861 aaKnown RBP20.21■□□□□ 0.83
CMTM1-213ENST00000529506 PRDM6Q9NQX0 595 aa20.21■□□□□ 0.83
CMTM1-213ENST00000529506 COG5Q9UP83 839 aa20.21■□□□□ 0.83
CMTM1-213ENST00000529506 TTC28Q96AY4 2481 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 ATG7O95352 703 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 INSRRP14616 1297 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 CPA1P15085 419 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 GRB10Q13322 594 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 JAKMIP3Q5VZ66 844 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 FAM160B1Q5W0V3 765 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 FAM43BQ6ZT52 329 aaPredicted RBP20.2■□□□□ 0.82
CMTM1-213ENST00000529506 TMCO2Q7Z6W1 182 aaPredicted RBP20.2■□□□□ 0.82
CMTM1-213ENST00000529506 CCDC148Q8NFR7 591 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 PGBD1Q96JS3 809 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 RNF26Q9BY78 433 aaPredicted RBP20.2■□□□□ 0.82
CMTM1-213ENST00000529506 TMEM260Q9NX78 707 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 TRPC6Q9Y210 931 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 SQORQ9Y6N5 450 aa20.2■□□□□ 0.82
CMTM1-213ENST00000529506 MICAL3Q7RTP6 2002 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 LCHNA4D1U4 455 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 LINC01553A4QN01 128 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 M0QZ92 97 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 CHRNA1P02708 482 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 EVCP57679 992 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 HTRA4P83105 476 aaPredicted RBP20.19■□□□□ 0.82
CMTM1-213ENST00000529506 MKRN4PQ13434 485 aaPredicted RBP20.19■□□□□ 0.82
CMTM1-213ENST00000529506 RUFY3Q7L099 469 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 PLA2G4DQ86XP0 818 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 REXO1Q8N1G1 1221 aaKnown RBP20.19■□□□□ 0.82
CMTM1-213ENST00000529506 NME8Q8N427 588 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 DNAJB3Q8WWF6 145 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 TBC1D22BQ9NU19 505 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 TCEAL9Q9UHQ7 104 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 PTPRSQ13332 1948 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 NID2Q14112 1375 aa20.19■□□□□ 0.82
CMTM1-213ENST00000529506 NCOR1O75376 2440 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 PRUNE2Q8WUY3 3088 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 EPOPA6NHQ4 379 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 ARHGEF15O94989 841 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 IFNAR1P17181 557 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 IGBP1P78318 339 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 SETQ01105 290 aaPredicted RBP20.18■□□□□ 0.82
CMTM1-213ENST00000529506 MARCH8Q5T0T0 291 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 YME1L1Q96TA2 773 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 PCYT2Q99447 389 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 PCDHA2Q9Y5H9 948 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 CYP46A1Q9Y6A2 500 aa20.18■□□□□ 0.82
CMTM1-213ENST00000529506 POTEB3A0JP26 581 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 UPP2O95045 317 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 MRPS6P82932 125 aaKnown RBP20.17■□□□□ 0.82
CMTM1-213ENST00000529506 ITGB3BPQ13352 177 aaPredicted RBP20.17■□□□□ 0.82
CMTM1-213ENST00000529506 PLCB4Q15147 1175 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 PKN1Q16512 942 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 MIS18BP1Q6P0N0 1132 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 POTEBQ6S5H4 581 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 RUFY4Q6ZNE9 571 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 SP7Q8TDD2 431 aaPredicted RBP20.17■□□□□ 0.82
CMTM1-213ENST00000529506 SUGCTQ9HAC7 445 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 ZSWIM6Q9HCJ5 1215 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 SH3GLB2Q9NR46 395 aa20.17■□□□□ 0.82
CMTM1-213ENST00000529506 IPO5O00410 1097 aaKnown RBP20.16■□□□□ 0.82
CMTM1-213ENST00000529506 BACH1O14867 736 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 HBP1O60381 514 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
CMTM1-213ENST00000529506 CPLX2Q6PUV4 134 aaKnown RBP20.16■□□□□ 0.82
CMTM1-213ENST00000529506 ABHD15Q6UXT9 468 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 FBXO22Q8NEZ5 403 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 HLA-CQ95604 372 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 ZNF274Q96GC6 653 aaPredicted RBP20.16■□□□□ 0.82
CMTM1-213ENST00000529506 ZNF577Q9BSK1 485 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 FTHL17Q9BXU8 183 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 C22orf23Q9BZE7 217 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 TM6SF1Q9BZW5 370 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 MTUS1Q9ULD2 1270 aa20.16■□□□□ 0.82
CMTM1-213ENST00000529506 EYSQ5T1H1 3165 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 IGKV6D-21A0A0A0MT36 114 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 SMIM35A0A1B0GVV1 85 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.15■□□□□ 0.82
CMTM1-213ENST00000529506 FAM86B1E9PN63 330 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 TNFRSF10AO00220 468 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 LPXNO60711 386 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 FAM86B2P0C5J1 330 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 GHRP10912 638 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 MGAT3Q09327 533 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 NTRK3Q16288 839 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 PTPROQ16827 1216 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 FBXO47Q5MNV8 452 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 TSHZ1Q6ZSZ6 1077 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 CRYGNQ8WXF5 182 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 PHKBQ93100 1093 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 IL17RAQ96F46 866 aa20.15■□□□□ 0.82
CMTM1-213ENST00000529506 SLC26A6Q9BXS9 759 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms