RNA–Protein interactions for RNA: ENST00000529372.5

PSMD13-209, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 5

Gene PSMD13, Length 612 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-209	ENST00000529372	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	HCST	Q9UBK5	93 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	PNMA2	Q9UL42	364 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	DUSP12	Q9UNI6	340 aa		13.8	□□□□□ -0.2
PSMD13-209	ENST00000529372	KRBA1	A5PL33	1030 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	GGPS1	O95749	300 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	SRGAP2B	P0DMP2	458 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	UBA1	P22314	1058 aa	Known RBP	13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	ITIH3	Q06033	890 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	PDE12	Q6L8Q7	609 aa	Known RBP	13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	ZC3H14	Q6PJT7	736 aa	Known RBP	13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	RUFY4	Q6ZNE9	571 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	IFNL3	Q8IZI9	196 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	CLASRP	Q8N2M8	674 aa	Known RBP	13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	LMBR1	Q8WVP7	490 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	CHAMP1	Q96JM3	812 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	RTKN	Q9BST9	563 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	AAAS	Q9NRG9	546 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	UST	Q9Y2C2	406 aa		13.79	□□□□□ -0.2
PSMD13-209	ENST00000529372	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	GPAA1	O43292	621 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	NR3C2	P08235	984 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	IFIT2	P09913	472 aa	Known RBP	13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	EIF2AK2	P19525	551 aa	Known RBP	13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	COL9A3	Q14050	684 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	USH1G	Q495M9	461 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	PPP4R3B	Q5MIZ7	849 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	PLPP4	Q5VZY2	271 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	ZSCAN25	Q6NSZ9	544 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	FRAT1	Q92837	279 aa	Predicted RBP	13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	MAF1	Q9H063	256 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	CDV3	Q9UKY7	258 aa	Known RBP	13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	HCFC2	Q9Y5Z7	792 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	WDFY3	Q8IZQ1	3526 aa		13.78	□□□□□ -0.2
PSMD13-209	ENST00000529372	NBEA	Q8NFP9	2946 aa		13.77	□□□□□ -0.2
PSMD13-209	ENST00000529372	POTEM	A6NI47	508 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	PRR5-ARHGAP8	B1AHC4	643 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372		M0R2C6	588 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	EOMES	O95936	686 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	PDHB	P11177	359 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	CD52	P31358	61 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	ARHGAP8	P85298	464 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	PPARA	Q07869	468 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	TDG	Q13569	410 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	TPRN	Q4KMQ1	711 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	VARS2	Q5ST30	1063 aa	Known RBP	13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	CES5A	Q6NT32	575 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	KANK3	Q6NY19	840 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	POTEG	Q6S5H5	508 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	TSHZ1	Q6ZSZ6	1077 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	TRIM50	Q86XT4	487 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	PLCD3	Q8N3E9	789 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	PXMP2	Q9NR77	195 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	LZTS1	Q9Y250	596 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	TELO2	Q9Y4R8	837 aa		13.77	□□□□□ -0.21
PSMD13-209	ENST00000529372	ITPR1	Q14643	2758 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	NARS	O43776	548 aa	Known RBP	13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	MTHFR	P42898	656 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	LMNB2	Q03252	620 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	ZNF543	Q08ER8	600 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	KIAA1841	Q6NSI8	718 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	APPBP2	Q92624	585 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	CASP10	Q92851	521 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	TCF25	Q9BQ70	676 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	CYP26B1	Q9NR63	512 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	TMEM260	Q9NX78	707 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	PCDHB12	Q9Y5F1	795 aa		13.76	□□□□□ -0.21
PSMD13-209	ENST00000529372	NAV2	Q8IVL1	2488 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	LOXHD1	Q8IVV2	1947 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	TSPY2	A6NKD2	308 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	PATL2	C9JE40	543 aa	Known RBP	13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	FOXP2	O15409	715 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	SNHG28	P0DPA3	235 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	GNAT1	P11488	350 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	GLUL	P15104	373 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	ARHGAP4	P98171	946 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	TBC1D8B	Q0IIM8	1120 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	PPM1J	Q5JR12	505 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	C1orf210	Q8IVY1	113 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	GPR161	Q8N6U8	529 aa	Known RBP	13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	C12orf76	Q8N812	135 aa	Predicted RBP	13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	COLGALT1	Q8NBJ5	622 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	KIF1BP	Q96EK5	621 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	TMEM47	Q9BQJ4	181 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	KCNK12	Q9HB15	430 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	PARD6A	Q9NPB6	346 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	FBXL21	Q9UKT6	434 aa		13.75	□□□□□ -0.21
PSMD13-209	ENST00000529372	BPTF	Q12830	3046 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	OPLAH	O14841	1288 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	DCN	P07585	359 aa	Known RBP	13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	RLBP1	P12271	317 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	SCG2	P13521	617 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	GNAT2	P19087	354 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	PLCB3	Q01970	1234 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	HSP90AB4P	Q58FF6	505 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	ARHGEF16	Q5VV41	709 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	IL31RA	Q8NI17	732 aa		13.74	□□□□□ -0.21
PSMD13-209	ENST00000529372	MRPS27	Q92552	414 aa	Known RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms