RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 REV3LO60673 3130 aa17.87■□□□□ 0.45
CTSB-215ENST00000528965 KAT6AQ92794 2004 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.86■□□□□ 0.45
CTSB-215ENST00000528965 IGBP1P78318 339 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 MRPS6P82932 125 aaKnown RBP17.86■□□□□ 0.45
CTSB-215ENST00000528965 MGAT3Q09327 533 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 KRT32Q14532 448 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 LPIN1Q14693 890 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 IER5Q5VY09 327 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 WWC2Q6AWC2 1192 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 BANK1Q8NDB2 785 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 MXRA8Q9BRK3 442 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 NSUN3Q9H649 340 aaKnown RBP17.86■□□□□ 0.45
CTSB-215ENST00000528965 RIC8AQ9NPQ8 531 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 KCNH7Q9NS40 1196 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 FAM50BQ9Y247 325 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 CDY2AQ9Y6F7 541 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 NFASCO94856 1347 aa17.86■□□□□ 0.45
CTSB-215ENST00000528965 ZBTB43O43298 467 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 RB1P06400 928 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 AP3B2Q13367 1082 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 RALGAPA2Q2PPJ7 1873 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 FBXO47Q5MNV8 452 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 DNAJB3Q8WWF6 145 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 FTHL17Q9BXU8 183 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 ANO3Q9BYT9 981 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 LMAN2LQ9H0V9 348 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 SQORQ9Y6N5 450 aa17.85■□□□□ 0.45
CTSB-215ENST00000528965 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 C5orf67F2Z3F1 127 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 NCK2O43639 380 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 INSRRP14616 1297 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 SLC26A2P50443 739 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 RCAN1P53805 252 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 CEP55Q53EZ4 464 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 TMEM31Q5JXX7 168 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 MARCH8Q5T0T0 291 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 DHX32Q7L7V1 743 aaKnown RBP17.84■□□□□ 0.45
CTSB-215ENST00000528965 FAM49AQ9H0Q0 323 aaPredicted RBP17.84■□□□□ 0.45
CTSB-215ENST00000528965 HCN4Q9Y3Q4 1203 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 TRPV2Q9Y5S1 764 aa17.84■□□□□ 0.45
CTSB-215ENST00000528965 HMGB1P09429 215 aaKnown RBP17.83■□□□□ 0.44
CTSB-215ENST00000528965 ACTR2P61160 394 aa17.83■□□□□ 0.44
CTSB-215ENST00000528965 FGD1P98174 961 aa17.83■□□□□ 0.44
CTSB-215ENST00000528965 COL9A3Q14050 684 aaPredicted RBP17.83■□□□□ 0.44
CTSB-215ENST00000528965 PTCRAQ6ISU1 281 aaPredicted RBP17.83■□□□□ 0.44
CTSB-215ENST00000528965 PLPPR4Q7Z2D5 763 aa17.83■□□□□ 0.44
CTSB-215ENST00000528965 PABPC5Q96DU9 382 aaKnown RBP17.83■□□□□ 0.44
CTSB-215ENST00000528965 NLRC5Q86WI3 1866 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 STXBP3O00186 592 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 STAG3L1P0CL83 205 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 SSTR3P32745 418 aaPredicted RBP17.82■□□□□ 0.44
CTSB-215ENST00000528965 ZNF76P36508 570 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 BMPR1AP36894 532 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 SREBF1P36956 1147 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 STAT5BP51692 787 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 BTG3Q14201 252 aaPredicted RBP17.82■□□□□ 0.44
CTSB-215ENST00000528965 TCEAL5Q5H9L2 206 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 FAM160B1Q5W0V3 765 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 FAM43BQ6ZT52 329 aaPredicted RBP17.82■□□□□ 0.44
CTSB-215ENST00000528965 EP400NLQ6ZTU2 488 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
CTSB-215ENST00000528965 NEK9Q8TD19 979 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 PCYT2Q99447 389 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 EPHX3Q9H6B9 360 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 BARHL2Q9NY43 387 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 PCDHA2Q9Y5H9 948 aa17.82■□□□□ 0.44
CTSB-215ENST00000528965 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 CCDC196A0A1B0GTZ2 297 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 SMCO2A6NFE2 343 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 RBAK-RBAKDNI3L0D1 243 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 ENPP3O14638 875 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 CDC45O75419 566 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 CD52P31358 61 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 EXOSC10Q01780 885 aaKnown RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 PAK2Q13177 524 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 PLCB4Q15147 1175 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 TSGA10IPQ3SY00 556 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 NIPA1Q7RTP0 329 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 NPAS4Q8IUM7 802 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 FAM178BQ8IXR5 827 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 GJD3Q8N144 294 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 NME8Q8N427 588 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 CCDC12Q8WUD4 166 aaPredicted RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 CLP1Q92989 425 aaKnown RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 FAM122AQ96E09 287 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 PGBD1Q96JS3 809 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 PLVAPQ9BX97 442 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 RC3H2Q9HBD1 1191 aaKnown RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 AGO4Q9HCK5 861 aaKnown RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 TCEAL9Q9UHQ7 104 aa17.81■□□□□ 0.44
CTSB-215ENST00000528965 NAP1L2Q9ULW6 460 aaPredicted RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 V9GY48 417 aaPredicted RBP17.81■□□□□ 0.44
CTSB-215ENST00000528965 IGSF9BQ9UPX0 1349 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 SMIM35A0A1B0GVV1 85 aa17.8■□□□□ 0.44
CTSB-215ENST00000528965 POTEB3A0JP26 581 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms