RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CCND3P30281 292 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 CCT6AP40227 531 aaKnown RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 UBE2HP62256 183 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 CEBPZQ03701 1054 aaKnown RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 ITGB3BPQ13352 177 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 XKR3Q5GH77 459 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 PDXDC2PQ6P474 469 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 NFRKBQ6P4R8 1299 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 ABHD15Q6UXT9 468 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 C4orf19Q8IY42 314 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 CKAP2LQ8IYA6 745 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 IQUBQ8NA54 791 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 TMEM87AQ8NBN3 555 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 RETREG2Q8NC44 543 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 SNX29Q8TEQ0 813 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 AFG1LQ8WV93 481 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 LEO1Q8WVC0 666 aaPredicted RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 CCDC47Q96A33 483 aaKnown RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 DEFB118Q96PH6 123 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 UNC93B1Q9H1C4 597 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 PKD2L1Q9P0L9 805 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 TFIP11Q9UBB9 837 aaKnown RBP8.88□□□□□ -0.99
SSBP3-211ENST00000528787 VAV3Q9UKW4 847 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 OGDHLQ9ULD0 1010 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 ZDHHC9Q9Y397 364 aa8.88□□□□□ -0.99
SSBP3-211ENST00000528787 PHLPP2Q6ZVD8 1323 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 NRCAMQ92823 1304 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 IGKV6D-21A0A0A0MT36 114 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 H3BRB1 525 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 DDX39AO00148 427 aaKnown RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 TLR3O15455 904 aaKnown RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 MAGEB2O15479 319 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 CHMP2AO43633 222 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 DTNBO60941 627 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 ATP9AO75110 1047 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 ARIH2O95376 493 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 MBD3O95983 291 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 LGALS2P05162 132 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 MYL3P08590 195 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 DNM2P50570 870 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 SEMA3FQ13275 785 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 HSDL1Q3SXM5 330 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 ZNF484Q5JVG2 852 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 B3GNT9Q6UX72 402 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 CABP7Q86V35 215 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 CEP57L1Q8IYX8 460 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 CCDC155Q8N6L0 562 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 C7orf31Q8N865 590 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 C4orf32Q8N8J7 132 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 SLC17A8Q8NDX2 589 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 TRPV1Q8NER1 839 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 U2AF1L4Q8WU68 220 aaKnown RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 MRPS27Q92552 414 aaKnown RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 SYAP1Q96A49 352 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 EIF2AK1Q9BQI3 630 aaKnown RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 CRISPLD2Q9H0B8 497 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 TMEM60Q9H2L4 133 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 UNC45AQ9H3U1 944 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 TUT1Q9H6E5 874 aaKnown RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 ANKEF1Q9NU02 776 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 FBXO2Q9UK22 296 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 MAFBQ9Y5Q3 323 aaPredicted RBP8.87□□□□□ -0.99
SSBP3-211ENST00000528787 DOCK5Q9H7D0 1870 aa8.87□□□□□ -0.99
SSBP3-211ENST00000528787 IGSF9BQ9UPX0 1349 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 A0A0U1RQG5 324 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 POTEB3A0JP26 581 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 ADAMTS3O15072 1205 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 ADAMTS4O75173 837 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 F2P00734 622 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 MYCNP04198 464 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 MARCKSP29966 332 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 RFC5P40937 340 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 STAT6P42226 847 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 PURAQ00577 322 aaKnown RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 SP2Q02086 613 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 SP4Q02446 784 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 LRRC41Q15345 812 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 SKOR2Q2VWA4 1001 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 FOXD4L6Q3SYB3 417 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 HYIQ5T013 277 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 RRAGBQ5VZM2 374 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 LHX8Q68G74 356 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 SWSAP1Q6NVH7 229 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 FAM173BQ6P4H8 233 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 POTEBQ6S5H4 581 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 FOXD4L3Q6VB84 417 aaPredicted RBP8.86□□□□□ -0.99
SSBP3-211ENST00000528787 NECAB2Q7Z6G3 386 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 RSPH3Q86UC2 560 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 SESTD1Q86VW0 696 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 TPH2Q8IWU9 490 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 MCPH1Q8NEM0 835 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 KLHDC9Q8NEP7 349 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 ATP8B4Q8TF62 1192 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 TCP11Q8WWU5 503 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 SLC7A3Q8WY07 619 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 HSD17B14Q9BPX1 270 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 LXNQ9BS40 222 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 STARD7Q9NQZ5 370 aa8.86□□□□□ -0.99
SSBP3-211ENST00000528787 GABBR1Q9UBS5 961 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms