RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 BEND3Q5T5X7 828 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 UTP14CQ5TAP6 766 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 MTERF4Q7Z6M4 381 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 TLK2Q86UE8 772 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 CCDC82Q8N4S0 544 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 KLHDC4Q8TBB5 520 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 ACER1Q8TDN7 264 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 SH3RF3Q8TEJ3 882 aaPredicted RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 TGFBRAP1Q8WUH2 860 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 PPP2R3CQ969Q6 453 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 ATG4CQ96DT6 458 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 RPGRIP1Q96KN7 1286 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 ALDH8A1Q9H2A2 487 aaPredicted RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 BICC1Q9H694 974 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 IGSF5Q9NSI5 407 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 TRMT13Q9NUP7 481 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 DLL3Q9NYJ7 618 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 GDF2Q9UK05 429 aaPredicted RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 PALD1Q9ULE6 856 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 NOVA2Q9UNW9 492 aaKnown RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 ZNF232Q9UNY5 417 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 INSL6Q9Y581 213 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 CTDP1Q9Y5B0 961 aaPredicted RBP4.83□□□□□ -1.64
CHD7-205ENST00000527825 MYO10Q9HD67 2058 aa4.83□□□□□ -1.64
CHD7-205ENST00000527825 FANCMQ8IYD8 2048 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 EPG5Q9HCE0 2579 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 MAP1BP46821 2468 aaKnown RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 ABHD14A-ACY1A0A1B0GW23 586 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 LOC730098B7Z3J9 87 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 H3BNC9 293 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 EML1O00423 815 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 MPHOSPH10O00566 681 aaKnown RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 DYNC1LI2O43237 492 aaPredicted RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 LGR5O75473 907 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 SNAI1O95863 264 aaPredicted RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 PDGFBP01127 241 aaPredicted RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 ICAM3P32942 547 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 LTBRP36941 435 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 TXLNAP40222 546 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 STAT3P40763 770 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 MCAMP43121 646 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 DEFB103AP81534 67 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 CTBSQ01459 385 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 CCDC173Q0VFZ6 552 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 COL9A3Q14050 684 aaPredicted RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 IKBKEQ14164 716 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 TMEM132BQ14DG7 1078 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 LRRFIP1Q32MZ4 808 aaKnown RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 EPC2Q52LR7 807 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 SH3PXD2AQ5TCZ1 1133 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 CNKSR3Q6P9H4 555 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 CLEC17AQ6ZS10 378 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 RIOX2Q8IUF8 465 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 GOLGA6L1Q8N7Z2 621 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 TMEM105Q8N8V8 129 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 CYP2W1Q8TAV3 490 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.82□□□□□ -1.64
CHD7-205ENST00000527825 EDARADDQ8WWZ3 215 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 SCG3Q8WXD2 468 aaKnown RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 SPOCK3Q9BQ16 436 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 PHF7Q9BWX1 381 aaPredicted RBP4.82□□□□□ -1.64
CHD7-205ENST00000527825 SRCIN1Q9C0H9 1055 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 SH2D4AQ9H788 454 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 DNAJC18Q9H819 358 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 INCENPQ9NQS7 918 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 AATFQ9NY61 560 aaKnown RBP eCLIP4.82□□□□□ -1.64
CHD7-205ENST00000527825 LRP2BPQ9P2M1 347 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 PCDHGC5Q9Y5F6 944 aa4.82□□□□□ -1.64
CHD7-205ENST00000527825 KIAA1671Q9BY89 1806 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ATRXP46100 2492 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 FLT1P17948 1338 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 PDS5AQ29RF7 1337 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 A0A1W2PNR3 127 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 EYA2O00167 538 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 MSTNO14793 375 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ADCY6O43306 1168 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 CSPG5O95196 566 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ATG7O95352 703 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 AMHP03971 560 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 MYL3P08590 195 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 USP5P45974 858 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 CHMP4BP1P59074 171 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 DLX2Q07687 328 aaPredicted RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 HYAL1Q12794 435 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 MTMR3Q13615 1198 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 RASGRF1Q13972 1273 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ELOAQ14241 798 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 ANGPT1Q15389 498 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 BRDTQ58F21 947 aaPredicted RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 GORABQ5T7V8 394 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 FIGNL1Q6PIW4 674 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ZC3H14Q6PJT7 736 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 MAMDC4Q6UXC1 1216 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 SLCO4C1Q6ZQN7 724 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ARMCX2Q7L311 632 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 ZSCAN30Q86W11 494 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 NLRP8Q86W28 1048 aa4.81□□□□□ -1.64
CHD7-205ENST00000527825 METTL16Q86W50 562 aaKnown RBP4.81□□□□□ -1.64
CHD7-205ENST00000527825 SMC5Q8IY18 1101 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms