RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 SLC37A4O43826 429 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 PSMD10O75832 226 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 ACRP10323 421 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 PLCB4Q15147 1175 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 C9orf50Q5SZB4 431 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 FAM160B1Q5W0V3 765 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 SMAP1Q8IYB5 467 aaPredicted RBP18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 CCDC155Q8N6L0 562 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 ETNPPLQ8TBG4 499 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 CAGE1Q8TC20 777 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 IL23AQ9NPF7 189 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 ZNF302Q9NR11 478 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 PCDHA10Q9Y5I2 948 aa18.34■□□□□ 0.53
SSSCA1-202ENST00000526433 NRCAMQ92823 1304 aa18.33■□□□□ 0.53
SSSCA1-202ENST00000526433 PSAPP07602 524 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 IQCF3P0C7M6 154 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 ADAM17P78536 824 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 PPFIA1Q13136 1202 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 TRIM71Q2Q1W2 868 aaKnown RBP18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 SERINC5Q86VE9 423 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 CCDC60Q8IWA6 550 aaPredicted RBP18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 AFAP1L1Q8TED9 768 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 TNPO1Q92973 898 aaKnown RBP18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 WNT8BQ93098 351 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 FOXP1Q9H334 677 aaPredicted RBP18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 UNC45AQ9H3U1 944 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 DISC1Q9NRI5 854 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 KIF3AQ9Y496 699 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 WDR81Q562E7 1941 aa18.33■□□□□ 0.52
SSSCA1-202ENST00000526433 WDR64B1ANS9 1081 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 MARCH6O60337 910 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 CKBP12277 381 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 INSRRP14616 1297 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 GJB2P29033 226 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 SLC26A2P50443 739 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 GRIK4Q16099 956 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 PDXDC2PQ6P474 469 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 FAM20AQ96MK3 541 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 KCNMB3Q9NPA1 279 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 SMC3Q9UQE7 1217 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 TRPC6Q9Y210 931 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 MAFBQ9Y5Q3 323 aaPredicted RBP18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 SCN5AQ14524 2016 aa18.32■□□□□ 0.52
SSSCA1-202ENST00000526433 POTEB3A0JP26 581 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 RRN3P2A6NIE6 340 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 TBX3O15119 743 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 CHMP2AO43633 222 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 SELPP16109 830 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 ATP4AP20648 1035 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 IGBP1P78318 339 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 RBL2Q08999 1139 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 POTEBQ6S5H4 581 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 B3GNT9Q6UX72 402 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 ZNF365Q70YC5 407 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 VWCEQ96DN2 955 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 GABBR1Q9UBS5 961 aa18.31■□□□□ 0.52
SSSCA1-202ENST00000526433 WNT7AO00755 349 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 HBP1O60381 514 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 FGBP02675 491 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 ATP2B1P20020 1258 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 SFNP31947 248 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 RFC2P35250 354 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 THPOP40225 353 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 JAK3P52333 1124 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 CUL4AQ13619 759 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 GNL2Q13823 731 aaKnown RBP18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 MARCH8Q5T0T0 291 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 ZNF618Q5T7W0 954 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 LRRC8DQ7L1W4 858 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 MIER3Q7Z3K6 550 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 DEFB128Q7Z7B8 93 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 POTEDQ86YR6 584 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 RDM1Q8NG50 284 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 HAS1Q92839 578 aa18.3■□□□□ 0.52
SSSCA1-202ENST00000526433 TET1Q8NFU7 2136 aa18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 FXR1P51114 621 aaKnown RBP eCLIP18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 LRIT3Q3SXY7 679 aa18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 PSRC1Q6PGN9 363 aaPredicted RBP18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 TRMT1LQ7Z2T5 733 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 NOSTRINQ8IVI9 506 aa18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 CKAP2LQ8IYA6 745 aa18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 ATP8B4Q8TF62 1192 aa18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 TRAPPC12Q8WVT3 735 aa18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 RNPC3Q96LT9 517 aaKnown RBP18.29■□□□□ 0.52
SSSCA1-202ENST00000526433 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 KIF28PB7ZC32 967 aa18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 U2AF2P26368 475 aaKnown RBP eCLIP18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 GPNMBQ14956 572 aa18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 ZNF484Q5JVG2 852 aa18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 TRAF7Q6Q0C0 670 aa18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 RUFY4Q6ZNE9 571 aa18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 SLFN12Q8IYM2 578 aa18.28■□□□□ 0.52
SSSCA1-202ENST00000526433 TUBE1Q9UJT0 475 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms