RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
NEDD8-204ENST00000526430 CCDC62Q6P9F0 684 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 FRMD5Q7Z6J6 570 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 FIBCD1Q8N539 461 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 DNERQ8NFT8 737 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 AFG1LQ8WV93 481 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 CLP1Q92989 425 aaKnown RBP12.6□□□□□ -0.39
NEDD8-204ENST00000526430 MTMR8Q96EF0 704 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 IFIH1Q9BYX4 1025 aaKnown RBP12.6□□□□□ -0.39
NEDD8-204ENST00000526430 TPCN1Q9ULQ1 816 aa12.6□□□□□ -0.39
NEDD8-204ENST00000526430 USP15Q9Y4E8 981 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-204ENST00000526430 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-204ENST00000526430 ERICH2A1L162 156 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 RSPH10B2B2RC85 870 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 B4DLN1 442 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 HAS3O00219 553 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 NFIBO00712 420 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 DDAH1O94760 285 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 ARIH2O95376 493 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 LARGE1O95461 756 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 F2P00734 622 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 PDGFBP01127 241 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-204ENST00000526430 RSPH10BP0C881 870 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 MRPL12P52815 198 aaKnown RBP12.59□□□□□ -0.39
NEDD8-204ENST00000526430 SNAP25P60880 206 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 ARHGAP1Q07960 439 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 NTRK3Q16288 839 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 DGKDQ16760 1214 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 DGLUCYQ7Z3D6 616 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 CMTR1Q8N1G2 835 aaKnown RBP12.59□□□□□ -0.39
NEDD8-204ENST00000526430 SRBD1Q8N5C6 995 aaKnown RBP12.59□□□□□ -0.39
NEDD8-204ENST00000526430 SEPT8Q92599 483 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 RMDN1Q96DB5 314 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 PLVAPQ9BX97 442 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 IGFLR1Q9H665 355 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 ISY1Q9ULR0 285 aaKnown RBP12.59□□□□□ -0.39
NEDD8-204ENST00000526430 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
NEDD8-204ENST00000526430 BAZ2BQ9UIF8 2168 aaKnown RBP12.59□□□□□ -0.39
NEDD8-204ENST00000526430 LOXHD1Q8IVV2 1947 aa12.58□□□□□ -0.39
NEDD8-204ENST00000526430 NID2Q14112 1375 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 CHD8Q9HCK8 2581 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 PTPDC1A2A3K4 754 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 KLRF2D3W0D1 207 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 UPP2O95045 317 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 PLEKHA8P1O95397 391 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 GH1P01241 217 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 PARP1P09874 1014 aaKnown RBP12.58□□□□□ -0.4
NEDD8-204ENST00000526430 ADD1P35611 737 aaKnown RBP12.58□□□□□ -0.4
NEDD8-204ENST00000526430 PSEN2P49810 448 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 CAMK1Q14012 370 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 SLC30A10Q6XR72 485 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 CATIPQ7Z7H3 387 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 SERINC5Q86VE9 423 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 TMEM105Q8N8V8 129 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 SUSD6Q92537 303 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 P2RX5Q93086 422 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-204ENST00000526430 RANBP17Q9H2T7 1088 aaKnown RBP12.58□□□□□ -0.4
NEDD8-204ENST00000526430 RC3H2Q9HBD1 1191 aaKnown RBP12.58□□□□□ -0.4
NEDD8-204ENST00000526430 SLC12A7Q9Y666 1083 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 ADGRA3Q8IWK6 1321 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 USP24Q9UPU5 2620 aa12.58□□□□□ -0.4
NEDD8-204ENST00000526430 PPP1R11O60927 126 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-204ENST00000526430 DTNBO60941 627 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 CAND2O75155 1236 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 GLP2RO95838 553 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 RCAN1P53805 252 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 PUM1Q14671 1186 aaKnown RBP eCLIP12.57□□□□□ -0.42e-9■■□□□ 12.1
NEDD8-204ENST00000526430 MFSD10Q14728 455 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 ME3Q16798 604 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 CCDC96Q2M329 555 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 GPATCH4Q5T3I0 446 aaKnown RBP12.57□□□□□ -0.4
NEDD8-204ENST00000526430 SYDE2Q5VT97 1194 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 ADGRF4Q8IZF3 695 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 APBB2Q92870 758 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-204ENST00000526430 RPGRIP1Q96KN7 1286 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 CNTNAP3Q9BZ76 1288 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 PNMA2Q9UL42 364 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 ATRXP46100 2492 aa12.57□□□□□ -0.4
NEDD8-204ENST00000526430 ZBTB43O43298 467 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 HOXD8P13378 290 aaPredicted RBP12.56□□□□□ -0.4
NEDD8-204ENST00000526430 CALML3P27482 149 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 SMARCA1P28370 1054 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 KIAA0753Q2KHM9 967 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 NAALADL2Q58DX5 795 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 RNF207Q6ZRF8 634 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 TMTC3Q6ZXV5 915 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 MICU3Q86XE3 530 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 UBALD2Q8IYN6 164 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 CLEC4DQ8WXI8 215 aa12.56□□□□□ -0.4
NEDD8-204ENST00000526430 NCOA5Q9HCD5 579 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms