RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 HERC6Q8IVU3 1022 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 NECAB1Q8N987 351 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 TRAPPC12Q8WVT3 735 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 LENG9Q96B70 501 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 ZNF577Q9BSK1 485 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 PRDM12Q9H4Q4 367 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 SLC28A3Q9HAS3 691 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 GJB4Q9NTQ9 266 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 TUBE1Q9UJT0 475 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 PCDHA4Q9UN74 947 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 KCNJ14Q9UNX9 436 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 PCDHA11Q9Y5I1 949 aa15.27■□□□□ 0.04
USH1C-203ENST00000526181 IGKV6D-21A0A0A0MT36 114 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 M0R2N6 131 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 ARHGEF15O94989 841 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 CA3P07451 260 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 INSRRP14616 1297 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 CIITAP33076 1130 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 KCNJ6P48051 423 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 STAT5BP51692 787 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 SETQ01105 290 aaPredicted RBP15.26■□□□□ 0.03
USH1C-203ENST00000526181 ME3Q16798 604 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 PPP2R2DQ66LE6 453 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 ABHD15Q6UXT9 468 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 CCDC60Q8IWA6 550 aaPredicted RBP15.26■□□□□ 0.03
USH1C-203ENST00000526181 BLIDQ8IZY5 108 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 DBF4BQ8NFT6 615 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 TBCKQ8TEA7 893 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
USH1C-203ENST00000526181 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 MBLAC1A4D2B0 266 aaPredicted RBP15.25■□□□□ 0.03
USH1C-203ENST00000526181 CAND2O75155 1236 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 CDKL5O76039 1030 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 NEK4P51957 841 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 ANKRD1Q15327 319 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 C8orf34Q49A92 452 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
USH1C-203ENST00000526181 PLPPR4Q7Z2D5 763 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 DAGLBQ8NCG7 672 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 MAFAQ8NHW3 353 aaPredicted RBP15.25■□□□□ 0.03
USH1C-203ENST00000526181 PHOSPHO2Q8TCD6 241 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 GJA10Q969M2 543 aa15.25■□□□□ 0.03
USH1C-203ENST00000526181 PTPRSQ13332 1948 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 ABHD14A-ACY1A0A1B0GW23 586 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 BACH1O14867 736 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 MSH4O15457 936 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 TDP2O95551 362 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 CHRNA1P02708 482 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 FDPSP14324 419 aaKnown RBP15.24■□□□□ 0.03
USH1C-203ENST00000526181 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
USH1C-203ENST00000526181 IKBKEQ14164 716 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 PLEKHG4Q58EX7 1191 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 FAM26DQ5JW98 314 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 SWSAP1Q6NVH7 229 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 SPRED2Q7Z698 418 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 SLC17A8Q8NDX2 589 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 DNAJB3Q8WWF6 145 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 PHF20Q9BVI0 1012 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 FAM49AQ9H0Q0 323 aaPredicted RBP15.24■□□□□ 0.03
USH1C-203ENST00000526181 ZNF302Q9NR11 478 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 TBC1D22BQ9NU19 505 aa15.24■□□□□ 0.03
USH1C-203ENST00000526181 POTEB3A0JP26 581 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 LCHNA4D1U4 455 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 ATP4AP20648 1035 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 USP11P51784 963 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 MGAT3Q09327 533 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 ADGRE1Q14246 886 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 MIS18BP1Q6P0N0 1132 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 FAM117BQ6P1L5 589 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 TAF2Q6P1X5 1199 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 POTEBQ6S5H4 581 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 OXER1Q8TDS5 423 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 CERS4Q9HA82 394 aa15.23■□□□□ 0.03
USH1C-203ENST00000526181 TRIP12Q14669 1992 aaPredicted RBP15.23■□□□□ 0.03
USH1C-203ENST00000526181 CDH23Q9H251 3354 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 SIP14410 1827 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 RRN3P2A6NIE6 340 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 TLL1O43897 1013 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 GHRP10912 638 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 TMEM62Q0P6H9 643 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 NONOQ15233 471 aaKnown RBP eCLIP15.22■□□□□ 0.03
USH1C-203ENST00000526181 INF2Q27J81 1249 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 FAM160B1Q5W0V3 765 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 ZNF746Q6NUN9 644 aaPredicted RBP15.22■□□□□ 0.03
USH1C-203ENST00000526181 PDXDC2PQ6P474 469 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 TRMT1LQ7Z2T5 733 aaKnown RBP15.22■□□□□ 0.03
USH1C-203ENST00000526181 RPAINQ86UA6 219 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 SEPT8Q92599 483 aa15.22■□□□□ 0.03
USH1C-203ENST00000526181 ORC3Q9UBD5 711 aaPredicted RBP15.22■□□□□ 0.03
USH1C-203ENST00000526181 EPOPA6NHQ4 379 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 RFXAPO00287 272 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 CHMP2AO43633 222 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 JAK2O60674 1132 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 EIF5BO60841 1220 aaKnown RBP15.21■□□□□ 0.03
USH1C-203ENST00000526181 SLC26A2P50443 739 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 KRT76Q01546 638 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 TAP1Q03518 808 aa15.21■□□□□ 0.03
USH1C-203ENST00000526181 LPIN1Q14693 890 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms