RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TESK1Q15569 626 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 KIF18BQ86Y91 864 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 TEX2Q8IWB9 1127 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 RCBTB1Q8NDN9 531 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 TRMT2BQ96GJ1 504 aaKnown RBP6.11□□□□□ -1.43
CSDE1-211ENST00000525970 PCDH18Q9HCL0 1135 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 NTMQ9P121 344 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 FBLN5Q9UBX5 448 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 SHTN1A0MZ66 631 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 KPNA6O60684 536 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 ITGB3P05106 788 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 JMJD7P0C870 316 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 INSRRP14616 1297 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 MAGEA10P43363 369 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-211ENST00000525970 SARSP49591 514 aaKnown RBP6.1□□□□□ -1.43
CSDE1-211ENST00000525970 NEK4P51957 841 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 LSAMPQ13449 338 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 LRRC41Q15345 812 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 CDCA2Q69YH5 1023 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-211ENST00000525970 ZCCHC8Q6NZY4 707 aaKnown RBP6.1□□□□□ -1.43
CSDE1-211ENST00000525970 TTLL7Q6ZT98 887 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 SPATS2Q86XZ4 545 aaKnown RBP6.1□□□□□ -1.43
CSDE1-211ENST00000525970 CCDC146Q8IYE0 955 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 SMARCC2Q8TAQ2 1214 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 PLEKHO2Q8TD55 490 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 TMEM169Q96HH4 297 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 MAGEB10Q96LZ2 347 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-211ENST00000525970 PUS7LQ9H0K6 701 aaKnown RBP6.1□□□□□ -1.43
CSDE1-211ENST00000525970 NPFFR2Q9Y5X5 522 aa6.1□□□□□ -1.43
CSDE1-211ENST00000525970 LOC102724159A0A0B4J2E5 919 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 B4E1Z4 1266 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 NEMP1O14524 444 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 TPD52L2O43399 206 aaKnown RBP6.09□□□□□ -1.43
CSDE1-211ENST00000525970 AKAP10O43572 662 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 CRTAMO95727 393 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 FPR2P25090 351 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 CNR2P34972 360 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 RAB27AP51159 221 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 PPP2R5AQ15172 486 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 PWP2Q15269 919 aaKnown RBP6.09□□□□□ -1.43
CSDE1-211ENST00000525970 CFAP100Q494V2 611 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 ABHD17CQ6PCB6 329 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 DCAF4Q8WV16 495 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 PHF20Q9BVI0 1012 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 TRAF6Q9Y4K3 522 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 DUSP10Q9Y6W6 482 aa6.09□□□□□ -1.43
CSDE1-211ENST00000525970 KIF3BO15066 747 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 ZEB2O60315 1214 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 SCGB1D2O95969 90 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 FLT3P36888 993 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 GNALP38405 381 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 PUM1Q14671 1186 aaKnown RBP eCLIP6.08□□□□□ -1.446e-8■□□□□ 8.8
CSDE1-211ENST00000525970 CCSAPQ6IQ19 270 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-211ENST00000525970 KCNT2Q6UVM3 1135 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 ZNF761Q86XN6 746 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-211ENST00000525970 LINC00482Q8N8I6 264 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 NOX5Q96PH1 765 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 CAMKK2Q96RR4 588 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 TTC1Q99614 292 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 ZFYVE21Q9BQ24 234 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 CCDC8Q9H0W5 538 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-211ENST00000525970 IFT22Q9H7X7 185 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 GPR27Q9NS67 375 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 SPATA6Q9NWH7 488 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-211ENST00000525970 CLDND1Q9NY35 253 aa6.08□□□□□ -1.44
CSDE1-211ENST00000525970 COA3Q9Y2R0 106 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-211ENST00000525970 K7ESF4 209 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 ARVCFO00192 962 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 CBX4O00257 560 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 AQP7O14520 342 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 GABRDO14764 452 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 PEX14O75381 377 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 ID4P47928 161 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 ADAM17P78536 824 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 DSG1Q02413 1049 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 RSPO2Q6UXX9 243 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-211ENST00000525970 UBE2R2Q712K3 238 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-211ENST00000525970 CCAR1Q8IX12 1150 aaKnown RBP6.07□□□□□ -1.44
CSDE1-211ENST00000525970 TTC9BQ8N6N2 239 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 ZBTB8AQ96BR9 441 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 RBM15Q96T37 977 aaKnown RBP eCLIP6.07□□□□□ -1.443e-7■■■■□ 23.4
CSDE1-211ENST00000525970 RTFDC1Q9BY42 306 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-211ENST00000525970 AP5M1Q9H0R1 490 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 CDH19Q9H159 772 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 BCAS3Q9H6U6 928 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 SMPD4Q9NXE4 827 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 FBXL7Q9UJT9 491 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 APOBEC2Q9Y235 224 aaKnown RBP6.07□□□□□ -1.44
CSDE1-211ENST00000525970 SIT1Q9Y3P8 196 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 PCDHA9Q9Y5H5 950 aa6.07□□□□□ -1.44
CSDE1-211ENST00000525970 E2F8A0AVK6 867 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 MSCO60682 206 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 F2P00734 622 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 CYP2C8P10632 490 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 ITKQ08881 620 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 PIN1Q13526 163 aaPredicted RBP6.06□□□□□ -1.44
CSDE1-211ENST00000525970 MROH9Q5TGP6 573 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 PIK3R6Q5UE93 754 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 NLRP10Q86W26 655 aa6.06□□□□□ -1.44
CSDE1-211ENST00000525970 DCP2Q8IU60 420 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms