RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 ATP6V1G3Q96LB4 118 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 MXD3Q9BW11 206 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SEMA6BQ9H3T3 888 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 ATP8A2Q9NTI2 1148 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SWAP70Q9UH65 585 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 CNTNAP5Q8WYK1 1306 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 PXDNLA1KZ92 1463 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SERPING1P05155 500 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 SCP2P22307 547 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 TNIP1Q15025 636 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 WDR78Q5VTH9 848 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 CNBD1Q8NA66 436 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 HOOK2Q96ED9 719 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 PLVAPQ9BX97 442 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 VPS37BQ9H9H4 285 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 ALG13Q9NP73 1137 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 RGL1Q9NZL6 768 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 RAB21Q9UL25 225 aa7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 NOC2LQ9Y3T9 749 aaKnown RBP7.56□□□□□ -1.2
TGFBR3-207ENST00000525962 ENO4A6NNW6 628 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 UPP2O95045 317 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 MYCLP12524 364 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 MDH1P40925 334 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ALX1Q15699 326 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ODR4Q5SWX8 454 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 TTI2Q6NXR4 508 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 SLC51AQ86UW1 340 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 YIPF3Q9GZM5 350 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 TTC7AQ9ULT0 858 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 C3P01024 1663 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 SLC37A4O43826 429 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ATF7P17544 494 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 DR1Q01658 176 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ARL6IP4Q66PJ3 421 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 HAUS3Q68CZ6 603 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 TMED8Q6PL24 325 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 STXBP4Q6ZWJ1 553 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 SYNCQ9H7C4 482 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 UBE2TQ9NPD8 197 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 PSD3Q9NYI0 1048 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 TSKSQ9UJT2 592 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 KDM6AO15550 1401 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ARHGEF35A5YM69 484 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 THAP12O43422 761 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 PTK2Q05397 1052 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 NEDD9Q14511 834 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 EPC2Q52LR7 807 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 TTMPQ5BVD1 217 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 PDXDC1Q6P996 788 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 FAM178BQ8IXR5 827 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 GIMAP8Q8ND71 665 aaPredicted RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 WDR66Q8TBY9 1149 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 NSUN4Q96CB9 384 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 DUSP9Q99956 384 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 NCAPGQ9BPX3 1015 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 CARD10Q9BWT7 1032 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ANKRD2Q9GZV1 360 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 IKZF4Q9H2S9 585 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 TPX2Q9ULW0 747 aaKnown RBP7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ADGRL3Q9HAR2 1447 aa7.55□□□□□ -1.2
TGFBR3-207ENST00000525962 ANO9A1A5B4 782 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 GOLGA8SH3BPF8 625 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 GOLGA8MH3BSY2 632 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 OPLAHO14841 1288 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 CALUO43852 315 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 AFPP02771 609 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 SEC23AQ15436 765 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 APBB1IPQ7Z5R6 666 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 IRF2BP1Q8IU81 584 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 CCDC13Q8IYE1 715 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 FAM186BQ8IYM0 893 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 UBL4BQ8N7F7 174 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 C1orf54Q8WWF1 131 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 IFT74Q96LB3 600 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 PRMT1Q99873 361 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 STMN4Q9H169 189 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TMOD2Q9NZR1 351 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 CCNL1Q9UK58 526 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 L3MBTL1Q9Y468 752 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 A6NNZ2 444 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TXNDC9O14530 226 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 HIP1RO75146 1068 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 PRPHP41219 470 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TUBB8Q3ZCM7 444 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 ZC2HC1CQ53FD0 456 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TBC1D9BQ66K14 1250 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 WDR93Q6P2C0 686 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 UNC13DQ70J99 1090 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 CREG2Q8IUH2 290 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 SLF2Q8IX21 1173 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 SRRM1Q8IYB3 904 aaKnown RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 CYFIP2Q96F07 1278 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 ZMYND12Q9H0C1 365 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TAF1DQ9H5J8 278 aaPredicted RBP7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 OSGEPQ9NPF4 335 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 BARHL2Q9NY43 387 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 JCADQ9P266 1359 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 RFX7Q2KHR2 1363 aa7.54□□□□□ -1.2
TGFBR3-207ENST00000525962 TULP2O00295 520 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms