RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 DHX15O43143 795 aaKnown RBP12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 CCNE2O96020 404 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 CTSHP09668 335 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 CIITAP33076 1130 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 NLRP5P59047 1200 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 DEFB103AP81534 67 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 PPP2R2DQ66LE6 453 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 AZI2Q9H6S1 392 aa12.7□□□□□ -0.38
TRAPPC4-204ENST00000524797 COL4A4P53420 1690 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 EVPLQ92817 2033 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 MBLAC1A4D2B0 266 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 EDIL3O43854 480 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 PFKFB2O60825 505 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 EFCAB14O75071 495 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 SETQ01105 290 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 SCRN1Q12765 414 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 IKBKEQ14164 716 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 PLCB4Q15147 1175 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 MARCH8Q5T0T0 291 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 ABHD15Q6UXT9 468 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 PLPPR4Q7Z2D5 763 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 RPAINQ86UA6 219 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 AIFM3Q96NN9 605 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 TPCN1Q9ULQ1 816 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
TRAPPC4-204ENST00000524797 IGKV6D-21A0A0A0MT36 114 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 RRN3P2A6NIE6 340 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 IPO5O00410 1097 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 CA3P07451 260 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 INSRRP14616 1297 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 STAT5BP51692 787 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 IGBP1P78318 339 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 TAF2Q6P1X5 1199 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 FAM177A1Q8N128 213 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 DAGLBQ8NCG7 672 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 DBF4BQ8NFT6 615 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 GAS2L1Q99501 681 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 ZNF577Q9BSK1 485 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 TUBE1Q9UJT0 475 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 CDKL5O76039 1030 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 AK2P54819 239 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 MGAT3Q09327 533 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 PRR16Q569H4 304 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 FAM160B1Q5W0V3 765 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 TMCO2Q7Z6W1 182 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 BLIDQ8IZY5 108 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 SEPT8Q92599 483 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 LENG9Q96B70 501 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 STK36Q9NRP7 1315 aa12.68□□□□□ -0.38
TRAPPC4-204ENST00000524797 M0R2N6 131 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 ARHGEF15O94989 841 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 SEC24BO95487 1268 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 CHRNA1P02708 482 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 USP11P51784 963 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 ADGRE1Q14246 886 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 ANKRD1Q15327 319 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 NPY5RQ15761 445 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 ZNF746Q6NUN9 644 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 MIS18BP1Q6P0N0 1132 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 CCDC60Q8IWA6 550 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 DNAJB3Q8WWF6 145 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 ZBTB10Q96DT7 871 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 TBC1D22BQ9NU19 505 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 NLRC5Q86WI3 1866 aa12.67□□□□□ -0.38
TRAPPC4-204ENST00000524797 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 BACH1O14867 736 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 TLL1O43897 1013 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 SLC26A2P50443 739 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 TAP1Q03518 808 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 GALNT17Q6IS24 598 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 RSPH3Q86UC2 560 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 ZNF302Q9NR11 478 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 CTDNEP1O95476 244 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 AMHP03971 560 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 KRT76Q01546 638 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 TBCKQ8TEA7 893 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 ZBED2Q9BTP6 218 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 KCNJ14Q9UNX9 436 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 PCDHA2Q9Y5H9 948 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 CDY2AQ9Y6F7 541 aa12.66□□□□□ -0.38
TRAPPC4-204ENST00000524797 COL1A2P08123 1366 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 LCHNA4D1U4 455 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 MSH4O15457 936 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 HBP1O60381 514 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 DTNBO60941 627 aa12.65□□□□□ -0.38
TRAPPC4-204ENST00000524797 GJB5O95377 273 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms