RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 KCNH7Q9NS40 1196 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 CDY2AQ9Y6F7 541 aa18.6■□□□□ 0.57
HIF3A-208ENST00000524533 ATG2AQ2TAZ0 1938 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 NFASCO94856 1347 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 ADGRA3Q8IWK6 1321 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.59■□□□□ 0.57
HIF3A-208ENST00000524533 RRN3P2A6NIE6 340 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 hCG_1984214I3L0E3 225 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 RPLP2P05387 115 aaKnown RBP18.59■□□□□ 0.57
HIF3A-208ENST00000524533 CTNNB1P35222 781 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 MRPS6P82932 125 aaKnown RBP18.59■□□□□ 0.57
HIF3A-208ENST00000524533 LEXMQ3ZCV2 418 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 FBXO47Q5MNV8 452 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 TYW1BQ6NUM6 668 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 TSHZ1Q6ZSZ6 1077 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 TEX2Q8IWB9 1127 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 ZNF713Q8N859 430 aaPredicted RBP18.59■□□□□ 0.57
HIF3A-208ENST00000524533 PCYT2Q99447 389 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 ANO3Q9BYT9 981 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 RAPGEFL1Q9UHV5 662 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 TRPC6Q9Y210 931 aa18.59■□□□□ 0.57
HIF3A-208ENST00000524533 GOLGA8AA7E2F4 631 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 GOLGA8BA8MQT2 603 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 STXBP3O00186 592 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 FOSP01100 380 aaPredicted RBP18.58■□□□□ 0.56
HIF3A-208ENST00000524533 INSRRP14616 1297 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 EXOSC10Q01780 885 aaKnown RBP18.58■□□□□ 0.56
HIF3A-208ENST00000524533 DHX32Q7L7V1 743 aaKnown RBP18.58■□□□□ 0.56
HIF3A-208ENST00000524533 SKAP1Q86WV1 359 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 BANK1Q8NDB2 785 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 TNPO1Q92973 898 aaKnown RBP18.58■□□□□ 0.56
HIF3A-208ENST00000524533 ZBTB10Q96DT7 871 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 FAM49AQ9H0Q0 323 aaPredicted RBP18.58■□□□□ 0.56
HIF3A-208ENST00000524533 BRPF3Q9ULD4 1205 aa18.58■□□□□ 0.56
HIF3A-208ENST00000524533 KLF18A0A0U1RQI7 1052 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 ACTR2P61160 394 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 FUT2Q10981 343 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 AP3B2Q13367 1082 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 KRT32Q14532 448 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 ADCK5Q3MIX3 580 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 CEP55Q53EZ4 464 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 CENPQQ7L2Z9 268 aaPredicted RBP18.57■□□□□ 0.56
HIF3A-208ENST00000524533 CYP2W1Q8TAV3 490 aa18.57■□□□□ 0.56
HIF3A-208ENST00000524533 V9GY48 417 aaPredicted RBP18.57■□□□□ 0.56
HIF3A-208ENST00000524533 SMCO2A6NFE2 343 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 M0QZ92 97 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 CDC45O75419 566 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 ARP10275 920 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 ITGB3BPQ13352 177 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-208ENST00000524533 PLCB4Q15147 1175 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 TSGA10IPQ3SY00 556 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 IER5Q5VY09 327 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 RASEFQ8IZ41 740 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.56■□□□□ 0.56
HIF3A-208ENST00000524533 GLT8D2Q9H1C3 349 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 NSUN3Q9H649 340 aaKnown RBP18.56■□□□□ 0.56
HIF3A-208ENST00000524533 EPHX3Q9H6B9 360 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 RC3H2Q9HBD1 1191 aaKnown RBP18.56■□□□□ 0.56
HIF3A-208ENST00000524533 AGO4Q9HCK5 861 aaKnown RBP18.56■□□□□ 0.56
HIF3A-208ENST00000524533 TMEM260Q9NX78 707 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 BARHL2Q9NY43 387 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 TRPV2Q9Y5S1 764 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 LOXHD1Q8IVV2 1947 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 KIAA1671Q9BY89 1806 aa18.56■□□□□ 0.56
HIF3A-208ENST00000524533 C5orf67F2Z3F1 127 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 ENPP3O14638 875 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 CD52P31358 61 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 SREBF1P36956 1147 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 STAT5BP51692 787 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 TMEM62Q0P6H9 643 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 TCEAL5Q5H9L2 206 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 PTCRAQ6ISU1 281 aaPredicted RBP18.55■□□□□ 0.56
HIF3A-208ENST00000524533 PLPPR4Q7Z2D5 763 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 TRAPPC12Q8WVT3 735 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 C11orf84Q9BUA3 381 aaPredicted RBP18.55■□□□□ 0.56
HIF3A-208ENST00000524533 AGO3Q9H9G7 860 aaKnown RBP18.55■□□□□ 0.56
HIF3A-208ENST00000524533 NAP1L2Q9ULW6 460 aaPredicted RBP18.55■□□□□ 0.56
HIF3A-208ENST00000524533 PCDHA2Q9Y5H9 948 aa18.55■□□□□ 0.56
HIF3A-208ENST00000524533 TTC3P53804 2025 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 RB1P06400 928 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 HMGB1P09429 215 aaKnown RBP18.54■□□□□ 0.56
HIF3A-208ENST00000524533 LINC00271P0C7V0 271 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 IL9P15248 144 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 CDC27P30260 824 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 ZNF76P36508 570 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 BMPR1AP36894 532 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 CLK2P49760 499 aaKnown RBP18.54■□□□□ 0.56
HIF3A-208ENST00000524533 RCAN1P53805 252 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 FGD1P98174 961 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 BTG3Q14201 252 aaPredicted RBP18.54■□□□□ 0.56
HIF3A-208ENST00000524533 EP400NLQ6ZTU2 488 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 NEK9Q8TD19 979 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 LINC01599Q8WXQ3 324 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 KHSRPQ92945 711 aaKnown RBP eCLIP18.54■□□□□ 0.56
HIF3A-208ENST00000524533 PABPC5Q96DU9 382 aaKnown RBP18.54■□□□□ 0.56
HIF3A-208ENST00000524533 FTHL17Q9BXU8 183 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 SQORQ9Y6N5 450 aa18.54■□□□□ 0.56
HIF3A-208ENST00000524533 POTEB3A0JP26 581 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms