RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 SMCO2A6NFE2 343 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 SEPT4O43236 478 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 ACTN4O43707 911 aaKnown RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 ZMYND10O75800 440 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 FOSP01100 380 aaPredicted RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 ZNF865P0CJ78 1059 aaPredicted RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 FDX1P10109 184 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 SYN1P17600 705 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 SARSP49591 514 aaKnown RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 POSTNQ15063 836 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 LRRC26Q2I0M4 334 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 TKFCQ3LXA3 575 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 TMEM63BQ5T3F8 832 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 ARMCX2Q7L311 632 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 ZSCAN30Q86W11 494 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 HOMER1Q86YM7 354 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 SAMD3Q8N6K7 520 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 FAM133AQ8N9E0 248 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 ANKLE1Q8NAG6 615 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 RNF214Q8ND24 703 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 GPKOWQ92917 476 aaPredicted RBP eCLIP7.96□□□□□ -1.14
VPS11-201ENST00000524454 PIGSQ96S52 555 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 HTATIP2Q9BUP3 242 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 RAB34Q9BZG1 259 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 CCSER1Q9C0I3 900 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 SENP6Q9GZR1 1112 aaPredicted RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 CSRNP2Q9H175 543 aa7.96□□□□□ -1.14
VPS11-201ENST00000524454 ZMYND8Q9ULU4 1186 aaPredicted RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 DIS3Q9Y2L1 958 aaKnown RBP7.96□□□□□ -1.14
VPS11-201ENST00000524454 hCG_1642624A0A1W2PR95 340 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 BECN2A8MW95 431 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 ESPNB1AK53 854 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 PIK3CDO00329 1044 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 NEMFO60524 1076 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 PPP1R11O60927 126 aaPredicted RBP7.95□□□□□ -1.14
VPS11-201ENST00000524454 RARBP10826 455 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 COL6A1P12109 1028 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 ERCC5P28715 1186 aaPredicted RBP7.95□□□□□ -1.14
VPS11-201ENST00000524454 PPP1R2P41236 205 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 USP11P51784 963 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 ACVR2BQ13705 512 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 PDIA5Q14554 519 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 LRRC41Q15345 812 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 LONRF3Q496Y0 759 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 EARS2Q5JPH6 523 aaKnown RBP7.95□□□□□ -1.14
VPS11-201ENST00000524454 MAMDC4Q6UXC1 1216 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 DTHD1Q6ZMT9 781 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 RNF207Q6ZRF8 634 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 LAPTM4BQ86VI4 370 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 PLA2G4DQ86XP0 818 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 FBXO16Q8IX29 292 aaPredicted RBP7.95□□□□□ -1.14
VPS11-201ENST00000524454 CLIC6Q96NY7 704 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 AMNQ9BXJ7 453 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 KATNBL1Q9H079 304 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 DNAJC25Q9H1X3 360 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 XPNPEP3Q9NQH7 507 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 PDGFCQ9NRA1 345 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 RMND1Q9NWS8 449 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 SYNGAP1Q96PV0 1343 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 SYNRGQ9UMZ2 1314 aa7.95□□□□□ -1.14
VPS11-201ENST00000524454 KIAA1217Q5T5P2 1943 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 CYP3A7-CYP3A51PA0A087WV96 503 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 KBTBD13C9JR72 458 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 DNM1LO00429 736 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 TBX3O15119 743 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 POLR2DO15514 142 aaKnown RBP7.94□□□□□ -1.14
VPS11-201ENST00000524454 MSCO60682 206 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 ADCY5O95622 1261 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 OR52Z1P0C646 297 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 AKR1A1P14550 325 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 CYP3A7P24462 503 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 ADCYAP1R1P41586 468 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 ALDH5A1P51649 535 aaPredicted RBP7.94□□□□□ -1.14
VPS11-201ENST00000524454 RPS6P62753 249 aaKnown RBP7.94□□□□□ -1.14
VPS11-201ENST00000524454 MYL5Q02045 173 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 GHRHRQ02643 423 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 MORC3Q14149 939 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 TMEM266Q2M3C6 531 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 CCDC144BQ3MJ40 725 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 CNNM4Q6P4Q7 775 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 FBXO11Q86XK2 927 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 IGSF22Q8N9C0 903 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 SYMPKQ92797 1274 aaKnown RBP7.94□□□□□ -1.14
VPS11-201ENST00000524454 SMARCE1Q969G3 411 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 MBOAT7Q96N66 472 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 PHOX2BQ99453 314 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 LRRC27Q9C0I9 530 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 DISC1Q9NRI5 854 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 MAP3K20Q9NYL2 800 aaKnown RBP7.94□□□□□ -1.14
VPS11-201ENST00000524454 COL20A1Q9P218 1284 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 FAM184BQ9ULE4 1060 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 ZKSCAN5Q9Y2L8 839 aa7.94□□□□□ -1.14
VPS11-201ENST00000524454 VWA3AA6NCI4 1184 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 OPLAHO14841 1288 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 ZNF500O60304 480 aaPredicted RBP7.93□□□□□ -1.14
VPS11-201ENST00000524454 CFBP00751 764 aa7.93□□□□□ -1.14
VPS11-201ENST00000524454 MCM7P33993 719 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms