RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 FAM20AQ96MK3 541 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 BRMS1Q9HCU9 246 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 ERAP1Q9NZ08 941 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 PRKAG2Q9UGJ0 569 aa13.53□□□□□ -0.24
CLN8-207ENST00000524258 TRIP12Q14669 1992 aaPredicted RBP13.52□□□□□ -0.24
CLN8-207ENST00000524258 A0A1W2PPC1 479 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 C17orf102A2RUQ5 167 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 EML1O00423 815 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 PITPNM1O00562 1244 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 TBX3O15119 743 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 CCNT1O60563 726 aaKnown RBP13.52□□□□□ -0.25
CLN8-207ENST00000524258 CSF2RAP15509 400 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 MARK3P27448 753 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 UGCGQ16739 394 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 C9orf50Q5SZB4 431 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 LRCH2Q5VUJ6 765 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 SWSAP1Q6NVH7 229 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 POTEDQ86YR6 584 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 NOSTRINQ8IVI9 506 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.25
CLN8-207ENST00000524258 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 TMEM60Q9H2L4 133 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 DISC1Q9NRI5 854 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 ZNF215Q9UL58 517 aaPredicted RBP13.52□□□□□ -0.25
CLN8-207ENST00000524258 PCDHA10Q9Y5I2 948 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 IGSF9BQ9UPX0 1349 aa13.52□□□□□ -0.25
CLN8-207ENST00000524258 NRCAMQ92823 1304 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 K7ELQ4 463 aaPredicted RBP13.51□□□□□ -0.25
CLN8-207ENST00000524258 GAS7O60861 476 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 IQCF3P0C7M6 154 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 INSRRP14616 1297 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 CCL23P55773 120 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 FPGSQ05932 587 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 PPP2R5CQ13362 524 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 MBTPS1Q14703 1052 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLN8-207ENST00000524258 SHHQ15465 462 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 TMEM240Q5SV17 173 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 RASIP1Q5U651 963 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 MIS18BP1Q6P0N0 1132 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 RPAINQ86UA6 219 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 GLG1Q92896 1179 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 ZBTB10Q96DT7 871 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
CLN8-207ENST00000524258 SCLYQ96I15 445 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 NAP1L4Q99733 375 aaKnown RBP13.51□□□□□ -0.25
CLN8-207ENST00000524258 LBHD1Q9BQE6 289 aaPredicted RBP13.51□□□□□ -0.25
CLN8-207ENST00000524258 TEKT3Q9BXF9 490 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 OSBPL7Q9BZF2 842 aa13.51□□□□□ -0.25
CLN8-207ENST00000524258 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
CLN8-207ENST00000524258 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 CKBP12277 381 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 SLC26A2P50443 739 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 PPFIA1Q13136 1202 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 GRIK4Q16099 956 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 RUFY4Q6ZNE9 571 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 TDHQ8IZJ6 230 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 RDM1Q8NG50 284 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 CAGE1Q8TC20 777 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 ATP8B4Q8TF62 1192 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 ATP6V0A1Q93050 837 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 CEP89Q96ST8 783 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLN8-207ENST00000524258 AZI2Q9H6S1 392 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 IL23AQ9NPF7 189 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 ZNF302Q9NR11 478 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 SMC3Q9UQE7 1217 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.5□□□□□ -0.25
CLN8-207ENST00000524258 SZT2Q5T011 3432 aa13.5□□□□□ -0.25
CLN8-207ENST00000524258 POTEB3A0JP26 581 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 PSAPP07602 524 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 SFNP31947 248 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 TRAPPC10P48553 1259 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 JAK3P52333 1124 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 NBR1Q14596 966 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 TCTN1Q2MV58 587 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 ZNF618Q5T7W0 954 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 PDXDC2PQ6P474 469 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 POTEBQ6S5H4 581 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 TMEM199Q8N511 208 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 TRAPPC12Q8WVT3 735 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 WRAP73Q9P2S5 460 aaPredicted RBP13.49□□□□□ -0.25
CLN8-207ENST00000524258 GABBR1Q9UBS5 961 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 TET1Q8NFU7 2136 aa13.49□□□□□ -0.25
CLN8-207ENST00000524258 RRN3P2A6NIE6 340 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 SOX1O00570 391 aaPredicted RBP13.48□□□□□ -0.25
CLN8-207ENST00000524258 BACH1O14867 736 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 CHMP2AO43633 222 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 HBP1O60381 514 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 NBNO60934 754 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 CXCL10P02778 98 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 ACRP10323 421 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 SELPP16109 830 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLN8-207ENST00000524258 BFSP2Q13515 415 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
CLN8-207ENST00000524258 LRIT3Q3SXY7 679 aa13.48□□□□□ -0.25
CLN8-207ENST00000524258 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms