RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 DGKDQ16760 1214 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 TMEM266Q2M3C6 531 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 SH3RF1Q7Z6J0 888 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 IGSF22Q8N9C0 903 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 TMEM87AQ8NBN3 555 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 GIMAP8Q8ND71 665 aaPredicted RBP13.42□□□□□ -0.26
PVT1-215ENST00000522963 CSRNP2Q9H175 543 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 JPH1Q9HDC5 661 aaPredicted RBP13.42□□□□□ -0.26
PVT1-215ENST00000522963 SLC9A2Q9UBY0 812 aa13.42□□□□□ -0.26
PVT1-215ENST00000522963 POTEMA6NI47 508 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 EML1O00423 815 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 TLR3O15455 904 aaKnown RBP13.41□□□□□ -0.26
PVT1-215ENST00000522963 CHMP2AO43633 222 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 KPNA6O60684 536 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 CLTBP09497 229 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 LONP1P36776 959 aaKnown RBP13.41□□□□□ -0.26
PVT1-215ENST00000522963 MDM2Q00987 491 aaPredicted RBP13.41□□□□□ -0.26
PVT1-215ENST00000522963 CSPP1Q1MSJ5 1256 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 NBPF20Q3BBV1 942 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 HSDL1Q3SXM5 330 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 SPECC1Q5M775 1068 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 UTP14CQ5TAP6 766 aaKnown RBP13.41□□□□□ -0.26
PVT1-215ENST00000522963 C1orf53Q5VUE5 145 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 NCAPH2Q6IBW4 605 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 PPTC7Q8NI37 304 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 TMEM39AQ9NV64 488 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
PVT1-215ENST00000522963 GRIN2DO15399 1336 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 MROH7Q68CQ1 1323 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 CDC25AP30304 524 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 ACTR2P61160 394 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 KRT76Q01546 638 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 PDIA5Q14554 519 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 ZNF746Q6NUN9 644 aaPredicted RBP13.4□□□□□ -0.26
PVT1-215ENST00000522963 SHC4Q6S5L8 630 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
PVT1-215ENST00000522963 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
PVT1-215ENST00000522963 LBHD1Q9BQE6 289 aaPredicted RBP13.4□□□□□ -0.26
PVT1-215ENST00000522963 PDLIM7Q9NR12 457 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 LRWD1Q9UFC0 647 aa13.4□□□□□ -0.26
PVT1-215ENST00000522963 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.27
PVT1-215ENST00000522963 GSTTP1A0A1W2PQM5 241 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 TRIM43BA6NCK2 446 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 WDR64B1ANS9 1081 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 GADD45BO75293 160 aaPredicted RBP13.39□□□□□ -0.27
PVT1-215ENST00000522963 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
PVT1-215ENST00000522963 ATG7O95352 703 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 RAG1P15918 1043 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 MAGEA10P43363 369 aaPredicted RBP13.39□□□□□ -0.27
PVT1-215ENST00000522963 PSEN2P49810 448 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 CDK7P50613 346 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 FAAP100Q0VG06 881 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 EPHA7Q15375 998 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 ABHD15Q6UXT9 468 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 USP49Q70CQ1 688 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
PVT1-215ENST00000522963 AK8Q96MA6 479 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 GPR20Q99678 358 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 MMTAG2Q9BU76 263 aaKnown RBP13.39□□□□□ -0.27
PVT1-215ENST00000522963 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 TRPV6Q9H1D0 765 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 DISC1Q9NRI5 854 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 TCEAL9Q9UHQ7 104 aa13.39□□□□□ -0.27
PVT1-215ENST00000522963 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
PVT1-215ENST00000522963 MKI67P46013 3256 aaKnown RBP13.39□□□□□ -0.27
PVT1-215ENST00000522963 A0A1W2PQ27 194 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 A0A1W2PQ64 194 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 A0A1W2PQD8 194 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 SUPT20HL2P0C7V6 817 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 SFNP31947 248 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 MCM4P33991 863 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 JAK3P52333 1124 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 MFSD10Q14728 455 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 KIAA0753Q2KHM9 967 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 RESP18Q5W5W9 173 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 SMAP1Q8IYB5 467 aaPredicted RBP13.38□□□□□ -0.27
PVT1-215ENST00000522963 RDM1Q8NG50 284 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 SEPT1Q8WYJ6 367 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 SYMPKQ92797 1274 aaKnown RBP13.38□□□□□ -0.27
PVT1-215ENST00000522963 KAT2BQ92831 832 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 BADQ92934 168 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 EPSTI1Q96J88 318 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 TOX2Q96NM4 488 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 EIF2AK1Q9BQI3 630 aaKnown RBP13.38□□□□□ -0.27
PVT1-215ENST00000522963 PPP1R12CQ9BZL4 782 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 LMBRD1Q9NUN5 540 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 TRMT13Q9NUP7 481 aaKnown RBP13.38□□□□□ -0.27
PVT1-215ENST00000522963 RGL1Q9NZL6 768 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 NOD1Q9Y239 953 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 SAMM50Q9Y512 469 aa13.38□□□□□ -0.27
PVT1-215ENST00000522963 PCDHA10Q9Y5I2 948 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms