RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ANO3Q9BYT9 981 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 FAM49AQ9H0Q0 323 aaPredicted RBP11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 JPH1Q9HDC5 661 aaPredicted RBP11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 SLC9A2Q9UBY0 812 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 TRPC6Q9Y210 931 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 INSL6Q9Y581 213 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 DOCK5Q9H7D0 1870 aa11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 SPTBN5Q9NRC6 3674 aaKnown RBP11.69□□□□□ -0.54
CTNNA1-235ENST00000522730 CCDC196A0A1B0GTZ2 297 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 CHRNA1P02708 482 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 GHRP10912 638 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 INSRRP14616 1297 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 IBSPP21815 317 aaPredicted RBP11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 HOXC8P31273 242 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 ACTR2P61160 394 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 CCT2P78371 535 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 TMEM62Q0P6H9 643 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 CEP55Q53EZ4 464 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 TRMT1LQ7Z2T5 733 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 RSPH3Q86UC2 560 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 ADAMTS19Q8TE59 1207 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 TRAPPC12Q8WVT3 735 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 PHKBQ93100 1093 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 YME1L1Q96TA2 773 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 C17orf80Q9BSJ5 609 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 SUGCTQ9HAC7 445 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 AGO4Q9HCK5 861 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 TUBE1Q9UJT0 475 aa11.68□□□□□ -0.54
CTNNA1-235ENST00000522730 XIRP2A4UGR9 3374 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 LINC01553A4QN01 128 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 BACH1O14867 736 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 ADAMTS3O15072 1205 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 SCG2P13521 617 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 HSPA4P34932 840 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 STAT5BP51692 787 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 KCNQ1P51787 676 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 ERVK-21P61565 698 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 ADAM17P78536 824 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 PFKFB3Q16875 520 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 PLA2G4DQ86XP0 818 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 NECAB3Q96P71 396 aaPredicted RBP11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 PCYT2Q99447 389 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 LARP6Q9BRS8 491 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 SLC26A6Q9BXS9 759 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 IFIH1Q9BYX4 1025 aaKnown RBP11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 GLT8D2Q9H1C3 349 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 C6orf50Q9HD87 102 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 TANC1Q9C0D5 1861 aa11.67□□□□□ -0.54
CTNNA1-235ENST00000522730 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 TNFRSF10AO00220 468 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 MEIS1O00470 390 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 LPXNO60711 386 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 CAND2O75155 1236 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 REC8O95072 547 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 POU3F3P20264 500 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 RPS6KB1P23443 525 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 PSMA5P28066 241 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 LPIN1Q14693 890 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 AAK1Q2M2I8 961 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 FAM26DQ5JW98 314 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 MARCH8Q5T0T0 291 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 TAF2Q6P1X5 1199 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 TOP1MTQ969P6 601 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 UHRF1Q96T88 793 aaPredicted RBP11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 NCOA5Q9HCD5 579 aaKnown RBP11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 CDY2AQ9Y6F7 541 aa11.66□□□□□ -0.54
CTNNA1-235ENST00000522730 POTEB3A0JP26 581 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 RRN3P2A6NIE6 340 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 FAM86B1E9PN63 330 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 hCG_1984214I3L0E3 225 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 FAM86B2P0C5J1 330 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 SREBF1P36956 1147 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 MRPS6P82932 125 aaKnown RBP11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 AP3B2Q13367 1082 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 PLCB4Q15147 1175 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 IER5Q5VY09 327 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 SWSAP1Q6NVH7 229 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 POTEBQ6S5H4 581 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 EP400NLQ6ZTU2 488 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 CKAP2LQ8IYA6 745 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 ZNF713Q8N859 430 aaPredicted RBP11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 RASGRP4Q8TDF6 673 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 APBB2Q92870 758 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 KCNB2Q92953 911 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 TNPO1Q92973 898 aaKnown RBP11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 HLA-CQ95604 372 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 TCEAL9Q9UHQ7 104 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 GINS2Q9Y248 185 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 KAT6AQ92794 2004 aa11.65□□□□□ -0.54
CTNNA1-235ENST00000522730 NFASCO94856 1347 aa11.64□□□□□ -0.55
CTNNA1-235ENST00000522730 M0QZ92 97 aa11.64□□□□□ -0.55
CTNNA1-235ENST00000522730 ENPP3O14638 875 aa11.64□□□□□ -0.55
CTNNA1-235ENST00000522730 PRPF3O43395 683 aaKnown RBP11.64□□□□□ -0.55
CTNNA1-235ENST00000522730 CSPG5O95196 566 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms