RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 CDK5RAP3Q96JB5 506 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 KCNH3Q9ULD8 1083 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 MED24O75448 989 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 LGR5O75473 907 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 MMP3P08254 477 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 QARSP47897 775 aaKnown RBP28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 PSMC5P62195 406 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 DGKDQ16760 1214 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 FAM160B1Q5W0V3 765 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 SWSAP1Q6NVH7 229 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 RASSF8Q8NHQ8 419 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 ATP6V0A1Q93050 837 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 RGL1Q9NZL6 768 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 EMSYQ7Z589 1322 aa28.77■■■□□ 2.2
NKX2-1-204ENST00000522719 BACH1O14867 736 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 KARSQ15046 597 aaKnown RBP28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 CCDC60Q8IWA6 550 aaPredicted RBP28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 AFAP1L1Q8TED9 768 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 ARMC5Q96C12 935 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 LXNQ9BS40 222 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 GOLPH3LQ9H4A5 285 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 AZI2Q9H6S1 392 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 ZSWIM4Q9H7M6 989 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 XPNPEP3Q9NQH7 507 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 ZNF302Q9NR11 478 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 MAFBQ9Y5Q3 323 aaPredicted RBP28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 SYNRGQ9UMZ2 1314 aa28.76■■■□□ 2.19
NKX2-1-204ENST00000522719 HTTP42858 3142 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 LYPLA2O95372 231 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 NDUFA8P51970 172 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 CYP4A11Q02928 519 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 FAM160A1Q05DH4 1040 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 GRB10Q13322 594 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 FSCN1Q16658 493 aaKnown RBP28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 TPH2Q8IWU9 490 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 BANK1Q8NDB2 785 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 UNC93B1Q9H1C4 597 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 GABBR1Q9UBS5 961 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 IGSF9BQ9UPX0 1349 aa28.75■■■□□ 2.19
NKX2-1-204ENST00000522719 C6orf222P0C671 652 aaPredicted RBP28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 SYKP43405 635 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 STAT5BP51692 787 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 CTTNQ14247 550 aaKnown RBP28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 NFKBIBQ15653 356 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 ZRSR1Q15695 479 aaKnown RBP28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 TMEM119Q4V9L6 283 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 PLPPR4Q7Z2D5 763 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 C4orf19Q8IY42 314 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 PNMA5Q96PV4 448 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 PCYT2Q99447 389 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 SMARCAD1Q9H4L7 1026 aa28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 PAK6Q9NQU5 681 aaPredicted RBP28.74■■■□□ 2.19
NKX2-1-204ENST00000522719 POTEB3A0JP26 581 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 CTAGE5O15320 804 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 KPNA6O60684 536 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 ADAMTS4O75173 837 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 MBD3O95983 291 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 CST5P28325 142 aaPredicted RBP28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 SLC26A2P50443 739 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 RRAGBQ5VZM2 374 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 LHX8Q68G74 356 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 POTEBQ6S5H4 581 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 IQUBQ8NA54 791 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 ENGASEQ8NFI3 743 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 ZNF333Q96JL9 665 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 USP25Q9UHP3 1055 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 KIAA1024Q9UPX6 916 aa28.73■■■□□ 2.19
NKX2-1-204ENST00000522719 A0A087X0B3 334 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 POLR2DO15514 142 aaKnown RBP28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 ZEB2O60315 1214 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 LGALS2P05162 132 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 CCL5P13501 91 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 PLCG1P19174 1290 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 ECM1Q16610 540 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 FMR1NBQ8N0W7 255 aaPredicted RBP28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 PDILTQ8N807 584 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 GLG1Q92896 1179 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 PANK2Q9BZ23 570 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 DDX19AQ9NUU7 478 aaKnown RBP28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 STK17AQ9UEE5 414 aa28.72■■■□□ 2.19
NKX2-1-204ENST00000522719 PGK1P00558 417 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 SNW1Q13573 536 aaKnown RBP28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 MTFR1Q15390 333 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 UGCGQ16739 394 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 GNASQ5JWF2 1037 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 UTP14CQ5TAP6 766 aaKnown RBP28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 PDXDC2PQ6P474 469 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 POTEGQ6S5H5 508 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 NACC1Q96RE7 527 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 RNF208Q9H0X6 261 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 CUEDC2Q9H467 287 aa28.71■■■□□ 2.19
NKX2-1-204ENST00000522719 ZNF202O95125 648 aa28.7■■■□□ 2.19
NKX2-1-204ENST00000522719 XRCC6P12956 609 aaKnown RBP eCLIP28.7■■■□□ 2.19
NKX2-1-204ENST00000522719 LIG1P18858 919 aa28.7■■■□□ 2.19
NKX2-1-204ENST00000522719 STAT6P42226 847 aa28.7■■■□□ 2.19
NKX2-1-204ENST00000522719 E2F4Q16254 413 aa28.7■■■□□ 2.19
NKX2-1-204ENST00000522719 KLHDC9Q8NEP7 349 aa28.7■■■□□ 2.19
NKX2-1-204ENST00000522719 WRAP73Q9P2S5 460 aaPredicted RBP28.7■■■□□ 2.19
NKX2-1-204ENST00000522719 DNM3Q9UQ16 869 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms