RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PAG1Q9NWQ8 432 aa7.43□□□□□ -1.22
PABPC1-220ENST00000522658 TNNQ9UQP3 1299 aa7.43□□□□□ -1.22
PABPC1-220ENST00000522658 NOP58Q9Y2X3 529 aaKnown RBP7.43□□□□□ -1.22
PABPC1-220ENST00000522658 SLC4A4Q9Y6R1 1079 aa7.43□□□□□ -1.22
PABPC1-220ENST00000522658 MYO5AQ9Y4I1 1855 aaKnown RBP7.43□□□□□ -1.22
PABPC1-220ENST00000522658 DUSP11O75319 330 aaKnown RBP7.42□□□□□ -1.22
PABPC1-220ENST00000522658 CYP2D6P10635 497 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 CDK8P49336 464 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 FAAP100Q0VG06 881 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 CCDC85BQ15834 202 aaPredicted RBP7.42□□□□□ -1.22
PABPC1-220ENST00000522658 ZNF792Q3KQV3 632 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 AKNAD1Q5T1N1 836 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 MFSD5Q6N075 450 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 CEP85Q6P2H3 762 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 C16orf86Q6ZW13 317 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 CPXCR1Q8N123 301 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.42□□□□□ -1.22
PABPC1-220ENST00000522658 GPATCH3Q96I76 525 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 KRTAP4-12Q9BQ66 201 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 AP5M1Q9H0R1 490 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 ABHD16BQ9H3Z7 469 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 HIPK3Q9H422 1215 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 CHMP4BQ9H444 224 aaKnown RBP7.42□□□□□ -1.22
PABPC1-220ENST00000522658 FBXO28Q9NVF7 368 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 USP20Q9Y2K6 914 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 ELP1O95163 1332 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 ZBED9Q6R2W3 1325 aa7.42□□□□□ -1.22
PABPC1-220ENST00000522658 DNAH12Q6ZR08 3092 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ARVCFO00192 962 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ADAMTS4O75173 837 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 CABYRO75952 493 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ASGR1P07306 291 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ZNF865P0CJ78 1059 aaPredicted RBP7.41□□□□□ -1.22
PABPC1-220ENST00000522658 HOXD8P13378 290 aaPredicted RBP7.41□□□□□ -1.22
PABPC1-220ENST00000522658 CSF2RAP15509 400 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 TAL1P17542 331 aaPredicted RBP7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ITGB8P26012 769 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 TDO2P48775 406 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ACVR2BQ13705 512 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 LRRFIP1Q32MZ4 808 aaKnown RBP7.41□□□□□ -1.22
PABPC1-220ENST00000522658 HFE2Q6ZVN8 426 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 PRPF38AQ8NAV1 312 aaKnown RBP7.41□□□□□ -1.22
PABPC1-220ENST00000522658 USP38Q8NB14 1042 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ASB2Q96Q27 587 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 PBX4Q9BYU1 374 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 BOLA2Q9H3K6 86 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 HOMER2Q9NSB8 354 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 KCNMB2Q9Y691 235 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 PLXNA1Q9UIW2 1896 aa7.41□□□□□ -1.22
PABPC1-220ENST00000522658 ASB14A6NK59 587 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 MINDY4BA8MYZ0 360 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 CCER2I3L3R5 266 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 RAB11FIP3O75154 756 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 FGBP02675 491 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 APPP05067 770 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 SLC3A2P08195 630 aaKnown RBP7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ACRP10323 421 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ACTN1P12814 892 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 CST5P28325 142 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ADD2P35612 726 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 EPHB4P54760 987 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 CCDC144BQ3MJ40 725 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 KIAA1755Q5JYT7 1200 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 TMEM240Q5SV17 173 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 C12orf60Q5U649 245 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ZNF365Q70YC5 407 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ARMCX2Q7L311 632 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 TLK2Q86UE8 772 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 RPUSD2Q8IZ73 545 aaKnown RBP7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ZNF444Q8N0Y2 327 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-220ENST00000522658 STK11IPQ8N1F8 1099 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 CHST13Q8NET6 341 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 MPHOSPH6Q99547 160 aaKnown RBP7.4□□□□□ -1.22
PABPC1-220ENST00000522658 C1QTNF1Q9BXJ1 281 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 SEZ6LQ9BYH1 1024 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 NKX2-4Q9H2Z4 354 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ACAD9Q9H845 621 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 RAVER2Q9HCJ3 691 aaKnown RBP7.4□□□□□ -1.22
PABPC1-220ENST00000522658 IL23AQ9NPF7 189 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 FEM1BQ9UK73 627 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 TBX21Q9UL17 535 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 ZNF214Q9UL59 606 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-220ENST00000522658 RNF112Q9ULX5 631 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 SLC4A7Q9Y6M7 1214 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 RAD50Q92878 1312 aa7.4□□□□□ -1.22
PABPC1-220ENST00000522658 EYSQ5T1H1 3165 aa7.4□□□□□ -1.23
PABPC1-220ENST00000522658 COL11A1P12107 1806 aaPredicted RBP7.39□□□□□ -1.23
PABPC1-220ENST00000522658 CYP2D7A0A087X1C5 515 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 PRKAB2O43741 272 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 MMP20O60882 483 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 XYLBO75191 536 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 NDUFB10O96000 172 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 IGHA2P01877 340 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 TSPY3P0CV98 308 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 TSPY8P0CW00 308 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 EIF2AK2P19525 551 aaKnown RBP7.39□□□□□ -1.23
PABPC1-220ENST00000522658 STAT2P52630 851 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 HNRNPUQ00839 825 aaKnown RBP eCLIP7.39□□□□□ -1.23
PABPC1-220ENST00000522658 TNFAIP2Q03169 654 aa7.39□□□□□ -1.23
PABPC1-220ENST00000522658 BRDTQ58F21 947 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms