RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SH3RF1Q7Z6J0 888 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 HSD17B14Q9BPX1 270 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
CPNE3-205ENST00000522240 DDX41Q9UJV9 622 aaKnown RBP14.63□□□□□ -0.07
CPNE3-205ENST00000522240 NKRFO15226 690 aaKnown RBP eCLIP14.62□□□□□ -0.07
CPNE3-205ENST00000522240 FKTNO75072 461 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 FARP2O94887 1054 aaPredicted RBP14.62□□□□□ -0.07
CPNE3-205ENST00000522240 ARIH2O95376 493 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 GGPS1O95749 300 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 CCNE2O96020 404 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 MYL1P05976 194 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 P4HBP07237 508 aaKnown RBP14.62□□□□□ -0.07
CPNE3-205ENST00000522240 SPATA31C1P0DKV0 1188 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 CYP2B6P20813 491 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 HOXD10P28358 340 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 SP2Q02086 613 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 ACVR2BQ13705 512 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 CATSPER3Q86XQ3 398 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 CD99L2Q8TCZ2 262 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 LARP4BQ92615 738 aaKnown RBP14.62□□□□□ -0.07
CPNE3-205ENST00000522240 DYDC2Q96IM9 177 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 FLRT1Q9NZU1 646 aa14.62□□□□□ -0.07
CPNE3-205ENST00000522240 POTEFA5A3E0 1075 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 DKC1O60832 514 aaKnown RBP eCLIP14.61□□□□□ -0.07
CPNE3-205ENST00000522240 ATG7O95352 703 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 LYPLA2O95372 231 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 PSAPP07602 524 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 TXNP10599 105 aaKnown RBP14.61□□□□□ -0.07
CPNE3-205ENST00000522240 FLT3LGP49771 235 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 ZNF445P59923 1031 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 ACTR2P61160 394 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 PRKCZQ05513 592 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 POSTNQ15063 836 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 ZRSR1Q15695 479 aaKnown RBP14.61□□□□□ -0.07
CPNE3-205ENST00000522240 CAMK4Q16566 473 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 ECM1Q16610 540 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 CCL14Q16627 93 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 CELF3Q5SZQ8 465 aaKnown RBP14.61□□□□□ -0.07
CPNE3-205ENST00000522240 POTEGQ6S5H5 508 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 CYFIP1Q7L576 1253 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 CTU1Q7Z7A3 348 aaKnown RBP14.61□□□□□ -0.07
CPNE3-205ENST00000522240 LRRC15Q8TF66 581 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 RAD54LQ92698 747 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 EMID1Q96A84 441 aaPredicted RBP14.61□□□□□ -0.07
CPNE3-205ENST00000522240 LXNQ9BS40 222 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 PANK2Q9BZ23 570 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 BLOC1S4Q9NUP1 217 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 SRRDQ9UH36 339 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 ZHX1Q9UKY1 873 aaPredicted RBP14.61□□□□□ -0.07
CPNE3-205ENST00000522240 GABRQQ9UN88 632 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 PCDHA10Q9Y5I2 948 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 IGSF9BQ9UPX0 1349 aa14.61□□□□□ -0.07
CPNE3-205ENST00000522240 GH1P01241 217 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 SUPT20HL2P0C7V6 817 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 QARSP47897 775 aaKnown RBP14.6□□□□□ -0.07
CPNE3-205ENST00000522240 PRMT2P55345 433 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 MDM2Q00987 491 aaPredicted RBP14.6□□□□□ -0.07
CPNE3-205ENST00000522240 CYP4A11Q02928 519 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 PKN2Q16513 984 aaKnown RBP14.6□□□□□ -0.07
CPNE3-205ENST00000522240 LY6KQ17RY6 165 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 IQSEC1Q6DN90 963 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 MIS18BP1Q6P0N0 1132 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 ABHD15Q6UXT9 468 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 ATP6V0A1Q93050 837 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 PAGE5Q96GU1 130 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 LRRC27Q9C0I9 530 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 ZSWIM4Q9H7M6 989 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 MLXIPQ9HAP2 919 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 PDGFCQ9NRA1 345 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 RGL1Q9NZL6 768 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 KIAA1024Q9UPX6 916 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 SAMM50Q9Y512 469 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 WDR81Q562E7 1941 aa14.6□□□□□ -0.07
CPNE3-205ENST00000522240 IGKV6D-21A0A0A0MT36 114 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 SYCE3A1L190 88 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 SLITRK3O94933 977 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 EYA4O95677 639 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 ZNF865P0CJ78 1059 aaPredicted RBP14.59□□□□□ -0.07
CPNE3-205ENST00000522240 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
CPNE3-205ENST00000522240 PSMC5P62195 406 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 AMPD3Q01432 767 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 CAP1Q01518 475 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 ARHGAP1Q07960 439 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 MFSD14CQ5VZR4 134 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 CNNM4Q6P4Q7 775 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 SV2BQ7L1I2 683 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 KCNK18Q7Z418 384 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 DHX37Q8IY37 1157 aaKnown RBP14.59□□□□□ -0.07
CPNE3-205ENST00000522240 C4orf19Q8IY42 314 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 ZNF296Q8WUU4 475 aaPredicted RBP14.59□□□□□ -0.07
CPNE3-205ENST00000522240 TRIB2Q92519 343 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 PLIN2Q99541 437 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 GZF1Q9H116 711 aaPredicted RBP14.59□□□□□ -0.07
CPNE3-205ENST00000522240 KIAA1468Q9P260 1216 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 TUBE1Q9UJT0 475 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 DNM3Q9UQ16 869 aa14.59□□□□□ -0.07
CPNE3-205ENST00000522240 EMSYQ7Z589 1322 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms