RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 TRIM31Q9BZY9 425 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 HDAC9Q9UKV0 1011 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 AHDC1Q5TGY3 1603 aaPredicted RBP13.36□□□□□ -0.27
DENND3-217ENST00000521835 GOLGA6CA6NDK9 693 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 CLSTN1O94985 981 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 GOLGA6DP0CG33 693 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 ECE1P42892 770 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 ZC2HC1CQ53FD0 456 aaPredicted RBP13.36□□□□□ -0.27
DENND3-217ENST00000521835 FAM71BQ8TC56 605 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 VEZTQ9HBM0 779 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 EPB41L5Q9HCM4 733 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 GOLGA6AQ9NYA3 693 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 DNM3Q9UQ16 869 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
DENND3-217ENST00000521835 ZEB2O60315 1214 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 AOC3Q16853 763 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 FBXO11Q86XK2 927 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 ARMCX3Q9UH62 379 aaPredicted RBP13.36□□□□□ -0.27
DENND3-217ENST00000521835 CHORDC1Q9UHD1 332 aaPredicted RBP13.36□□□□□ -0.27
DENND3-217ENST00000521835 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
DENND3-217ENST00000521835 BTAF1O14981 1849 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 DDX60LQ5H9U9 1706 aaKnown RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 CEP104O60308 925 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 NDUFB10O96000 172 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 KRT14P02533 472 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 NMT1P30419 496 aaKnown RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 ABCB5Q2M3G0 1257 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 CCNI2Q6ZMN8 369 aaPredicted RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 MIGA2Q7L4E1 593 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 TLR10Q9BXR5 811 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 NT5C3AQ9H0P0 336 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 DHX36Q9H2U1 1008 aaKnown RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 NOL4O94818 638 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 HEXIM1O94992 359 aaKnown RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 SYF2O95926 243 aaKnown RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 PPP1R2P41236 205 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 CARSP49589 748 aaKnown RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 JAG1P78504 1218 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 PDIA5Q14554 519 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
DENND3-217ENST00000521835 MYCT1Q8N699 235 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 CSRNP1Q96S65 589 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
DENND3-217ENST00000521835 LRRN2O75325 713 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 ARHGAP44Q17R89 818 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 ARSHQ5FYA8 562 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 TSEN2Q8NCE0 465 aaKnown RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 TAF4BQ92750 862 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 ELMO3Q96BJ8 720 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 CWC15Q9P013 229 aaKnown RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 MYH1P12882 1939 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 ANO9A1A5B4 782 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 GFPT2O94808 682 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 TRIM49P0CI25 452 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 TRIM49CP0CI26 452 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 POLD1P28340 1107 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 USP8P40818 1118 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 PTK2Q05397 1052 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 COG2Q14746 738 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 KLHDC7AQ5VTJ3 777 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 MAATS1Q7Z4T9 603 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 RNF217Q8TC41 542 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 LRRC27Q9C0I9 530 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 WNK3Q9BYP7 1800 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 A0A1W2PQJ5 194 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 GLI1P08151 1106 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 FAM153BP0C7A2 387 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 XRCC5P13010 732 aaKnown RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 EXOC3L4Q17RC7 722 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 FAM153CQ494X1 144 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 HGSNATQ68CP4 663 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 PPP4R3AQ6IN85 833 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 DDX42Q86XP3 938 aaKnown RBP eCLIP13.34□□□□□ -0.27
DENND3-217ENST00000521835 SP8Q8IXZ3 490 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 FAM76AQ8TAV0 307 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 FAM163AQ96GL9 167 aaPredicted RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
DENND3-217ENST00000521835 FAM153AQ9UHL3 310 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 SH3BP1Q9Y3L3 701 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
DENND3-217ENST00000521835 EML1O00423 815 aa13.33□□□□□ -0.28
DENND3-217ENST00000521835 FAM13AO94988 1023 aa13.33□□□□□ -0.28
DENND3-217ENST00000521835 HPDP32754 393 aaPredicted RBP13.33□□□□□ -0.28
DENND3-217ENST00000521835 HAUS3Q68CZ6 603 aa13.33□□□□□ -0.28
DENND3-217ENST00000521835 AMNQ9BXJ7 453 aa13.33□□□□□ -0.28
DENND3-217ENST00000521835 GCNT4Q9P109 453 aa13.33□□□□□ -0.28
DENND3-217ENST00000521835 CEP72Q9P209 647 aa13.33□□□□□ -0.28
DENND3-217ENST00000521835 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
DENND3-217ENST00000521835 SAMM50Q9Y512 469 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms