RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 KLRC3Q07444 240 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 LRMPQ12912 555 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 NR1I3Q14994 352 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 KARSQ15046 597 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 CDC37Q16543 378 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 QRICH1Q2TAL8 776 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 TMEM119Q4V9L6 283 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 TBCELQ5QJ74 424 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 DNTTIP2Q5QJE6 756 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 SYDE2Q5VT97 1194 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 ARMCX5Q6P1M9 558 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 RIPOR1Q6ZS17 1223 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 RASGRP2Q7LDG7 609 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 APTXQ7Z2E3 356 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 FAM160B2Q86V87 743 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 SIAH1Q8IUQ4 282 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 ZSCAN29Q8IWY8 852 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 ZFPM1Q8IX07 1006 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 NIM1KQ8IY84 436 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 SLFN12Q8IYM2 578 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 GRAMD1CQ8IYS0 662 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 ADSSL1Q8N142 457 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 CCAR2Q8N163 923 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 SIX5Q8N196 739 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 SAMD3Q8N6K7 520 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 RASSF8Q8NHQ8 419 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 FBXO41Q8TF61 875 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 CRYGNQ8WXF5 182 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 PRMT6Q96LA8 375 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 PANX2Q96RD6 677 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 MED15Q96RN5 788 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 CSRNP1Q96S65 589 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 TRIM9Q9C026 710 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 NT5C3AQ9H0P0 336 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 DEFB129Q9H1M3 183 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 THAP9Q9H5L6 903 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 TDRD3Q9H7E2 651 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 PSTPIP2Q9H939 334 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 KCNQ5Q9NR82 932 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 PIM2Q9P1W9 311 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 ZNF70Q9UC06 446 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 ADD3Q9UEY8 706 aaKnown RBP7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 TMX2Q9Y320 296 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 RABGAP1Q9Y3P9 1069 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 COL4A5P29400 1685 aa7.5□□□□□ -1.21
CTNNA1-228ENST00000521640 CNTNAP1P78357 1384 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 MYH7BA7E2Y1 1941 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 USP17L10C9JJH3 530 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 CDK2AP1O14519 115 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 CYP3A4P08684 503 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 BMP3P12645 472 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 DPEP1P16444 411 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 PLCG1P19174 1290 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 SREBF1P36956 1147 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 TNNI2P48788 182 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 EIF6P56537 245 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 ZNF280AP59817 542 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 FOXK2Q01167 660 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 TCP10Q12799 353 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 PSMD2Q13200 908 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 PTK7Q13308 1070 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 TNFAIP1Q13829 316 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 TNIP1Q15025 636 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 SYCP1Q15431 976 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 DBN1Q16643 649 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 Q4G0T1 1027 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 JAKMIP3Q5VZ66 844 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 KRT79Q5XKE5 535 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 ISM2Q6H9L7 571 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 MTERF4Q7Z6M4 381 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 FBXO11Q86XK2 927 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 FAM114A1Q8IWE2 563 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 COA7Q96BR5 231 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 ZNF837Q96EG3 531 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 MMTAG2Q9BU76 263 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 TRAIPQ9BWF2 469 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 CPVLQ9H3G5 476 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 VAT1LQ9HCJ6 419 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 GPAMQ9HCL2 828 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 KCNMB3Q9NPA1 279 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 INTS13Q9NVM9 706 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 SCHIP1Q9P0W5 487 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 BIN2Q9UBW5 565 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 LRWD1Q9UFC0 647 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 DDX25Q9UHL0 483 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 MTMR7Q9Y216 660 aa7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 R3HCC1Q9Y3T6 440 aaKnown RBP7.49□□□□□ -1.21
CTNNA1-228ENST00000521640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.49□□□□□ -1.211e-14■□□□□ 10.4
CTNNA1-228ENST00000521640 A0A1W2PQC6 194 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 PSMD14O00487 310 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 BACH1O14867 736 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 ZSCAN12O43309 604 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 EDIL3O43854 480 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 FGFR1OPO95684 399 aaKnown RBP7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 GH2P01242 217 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 ASNSP08243 561 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 TPM1P09493 284 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 MUTP22033 750 aa7.48□□□□□ -1.21
CTNNA1-228ENST00000521640 CCNE1P24864 410 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms