RNA–Protein interactions for RNA: ENST00000521610.5

HDAC2-212, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-212ENST00000521610 RIT2Q99578 217 aa12.12□□□□□ -0.47
HDAC2-212ENST00000521610 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
HDAC2-212ENST00000521610 SETD4Q9NVD3 440 aa12.12□□□□□ -0.47
HDAC2-212ENST00000521610 CEP290O15078 2479 aa12.12□□□□□ -0.47
HDAC2-212ENST00000521610 MSH4O15457 936 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 TDP2O95551 362 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 MMP1P03956 469 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 MARK3P27448 753 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 MCM2P49736 904 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 SLC26A2P50443 739 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 ADAM17P78536 824 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
HDAC2-212ENST00000521610 LETM2Q2VYF4 491 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 FAM160B1Q5W0V3 765 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 KRT40Q6A162 431 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 PIK3AP1Q6ZUJ8 805 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 LRRC8DQ7L1W4 858 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 NEK8Q86SG6 692 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
HDAC2-212ENST00000521610 HERVK_113Q902F9 699 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 SLC5A5Q92911 643 aa12.11□□□□□ -0.47
HDAC2-212ENST00000521610 NAP1L4Q99733 375 aaKnown RBP12.11□□□□□ -0.47
HDAC2-212ENST00000521610 MTIF3Q9H2K0 278 aaKnown RBP12.11□□□□□ -0.47
HDAC2-212ENST00000521610 RRN3P2A6NIE6 340 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 BACH1O14867 736 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 GAS7O60861 476 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 CAND2O75155 1236 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 PSAPP07602 524 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
HDAC2-212ENST00000521610 SMAD3P84022 425 aaKnown RBP12.1□□□□□ -0.47
HDAC2-212ENST00000521610 PPFIA1Q13136 1202 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 NR5A1Q13285 461 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 GRIK4Q16099 956 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 ZNF618Q5T7W0 954 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 RASIP1Q5U651 963 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 LRCH2Q5VUJ6 765 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 PPP4R3AQ6IN85 833 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 FAM184AQ8NB25 1140 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 TNFRSF25Q93038 417 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 WNT8BQ93098 351 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 VWCEQ96DN2 955 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 ZNF302Q9NR11 478 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 DDX25Q9UHL0 483 aaKnown RBP12.1□□□□□ -0.47
HDAC2-212ENST00000521610 PCDHA10Q9Y5I2 948 aa12.1□□□□□ -0.47
HDAC2-212ENST00000521610 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 POTEB3A0JP26 581 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 WDR64B1ANS9 1081 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 BTBD18B2RXH4 712 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 HBP1O60381 514 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 CCNT1O60563 726 aaKnown RBP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 PSMD10O75832 226 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 ACTN1P12814 892 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 INSRRP14616 1297 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 SFNP31947 248 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 THPOP40225 353 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 FOSBP53539 338 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 SAFBQ15424 915 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 EARS2Q5JPH6 523 aaKnown RBP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 TAF2Q6P1X5 1199 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 POTEBQ6S5H4 581 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 OTOP2Q7RTS6 562 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 CCDC60Q8IWA6 550 aaPredicted RBP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 DIS3L2Q8IYB7 885 aaKnown RBP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 ETNPPLQ8TBG4 499 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 C8orf76Q96K31 380 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 FTOQ9C0B1 505 aaKnown RBP eCLIP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
HDAC2-212ENST00000521610 MAFBQ9Y5Q3 323 aaPredicted RBP12.09□□□□□ -0.47
HDAC2-212ENST00000521610 TANC1Q9C0D5 1861 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 MBLAC1A4D2B0 266 aaPredicted RBP12.08□□□□□ -0.48
HDAC2-212ENST00000521610 RSPH10B2B2RC85 870 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 SLC37A4O43826 429 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 CXCL10P02778 98 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 RSPH10BP0C881 870 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 JAK3P52333 1124 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 IGBP1P78318 339 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 GPNMBQ14956 572 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 MARCH8Q5T0T0 291 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 RPAINQ86UA6 219 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 RSPH3Q86UC2 560 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 RDM1Q8NG50 284 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 ATP8B4Q8TF62 1192 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 TMX3Q96JJ7 454 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 FAM20AQ96MK3 541 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 DISC1Q9NRI5 854 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 GABBR1Q9UBS5 961 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 TUBE1Q9UJT0 475 aa12.08□□□□□ -0.48
HDAC2-212ENST00000521610 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
HDAC2-212ENST00000521610 TBX3O15119 743 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms