RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 SMAD2Q15796 467 aaKnown RBP12.34□□□□□ -0.43
MRPS28-208ENST00000521605 GALNT17Q6IS24 598 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 RBM43Q6ZSC3 357 aaKnown RBP12.34□□□□□ -0.43
MRPS28-208ENST00000521605 TRIM67Q6ZTA4 783 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 RPAINQ86UA6 219 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 MYOCDQ8IZQ8 938 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 DHX38Q92620 1227 aaKnown RBP12.34□□□□□ -0.43
MRPS28-208ENST00000521605 PHKBQ93100 1093 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 CHAMP1Q96JM3 812 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 CTAGE1Q96RT6 745 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 POP1Q99575 1024 aaKnown RBP12.34□□□□□ -0.43
MRPS28-208ENST00000521605 PRRX2Q99811 253 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
MRPS28-208ENST00000521605 NSUN3Q9H649 340 aaKnown RBP12.34□□□□□ -0.43
MRPS28-208ENST00000521605 GDPD2Q9HCC8 539 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
MRPS28-208ENST00000521605 TECTAO75443 2155 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 FAM237AA0A1B0GTK4 181 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 PALM3A6NDB9 673 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-208ENST00000521605 hCG_1984214I3L0E3 225 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 KPNA6O60684 536 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 PPP6R2O75170 966 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 TTLL1O95922 423 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 BMP15O95972 392 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 CXCL10P02778 98 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 CKBP12277 381 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 LTBRP36941 435 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
MRPS28-208ENST00000521605 DLX2Q07687 328 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-208ENST00000521605 BAATQ14032 418 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-208ENST00000521605 SLC39A14Q15043 492 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 PKN1Q16512 942 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 RILPL1Q5EBL4 403 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 ADALQ6DHV7 355 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 KCTD1Q719H9 257 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 FAM160B2Q86V87 743 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 NOSTRINQ8IVI9 506 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 ZNF713Q8N859 430 aaPredicted RBP12.33□□□□□ -0.44
MRPS28-208ENST00000521605 LINC00301Q8NCQ3 95 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 GMCL1P1Q8NEA9 526 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 MORC4Q8TE76 937 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 CHURC1Q8WUH1 139 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 MKL1Q969V6 931 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 USP28Q96RU2 1077 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 MYL10Q9BUA6 226 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 GRPEL1Q9HAV7 217 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 MTMR4Q9NYA4 1195 aa12.33□□□□□ -0.44
MRPS28-208ENST00000521605 ADD3Q9UEY8 706 aaKnown RBP12.33□□□□□ -0.44
MRPS28-208ENST00000521605 RBM47A0AV96 593 aaKnown RBP12.32□□□□□ -0.44
MRPS28-208ENST00000521605 A6NJR5 290 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 H3BNC9 293 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 STXBP3O00186 592 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 MBTPS2O43462 519 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 EFCAB14O75071 495 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 CAVIN2O95810 425 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 AMHP03971 560 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 SNHG28P0DPA3 235 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 RXRAP19793 462 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 CALML3P27482 149 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 SLC1A4P43007 532 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 TRAPPC10P48553 1259 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 PFKFB3Q16875 520 aaPredicted RBP12.32□□□□□ -0.44
MRPS28-208ENST00000521605 RASGRP2Q7LDG7 609 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 BMP8AQ7Z5Y6 402 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 FBXL6Q8N531 539 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 PHF20Q9BVI0 1012 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 BRMS1Q9HCU9 246 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 MTMR7Q9Y216 660 aa12.32□□□□□ -0.44
MRPS28-208ENST00000521605 KMT2EQ8IZD2 1858 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 SPTBN4Q9H254 2564 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 UPP2O95045 317 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 TXNP10599 105 aaKnown RBP12.31□□□□□ -0.44
MRPS28-208ENST00000521605 VCPP55072 806 aaKnown RBP12.31□□□□□ -0.44
MRPS28-208ENST00000521605 PDE4DQ08499 809 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-208ENST00000521605 COL19A1Q14993 1142 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 FOXD4L6Q3SYB3 417 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-208ENST00000521605 FAM173BQ6P4H8 233 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 FOXD4L3Q6VB84 417 aaPredicted RBP12.31□□□□□ -0.44
MRPS28-208ENST00000521605 TEX2Q8IWB9 1127 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 TMEM192Q8IY95 271 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 DIS3L2Q8IYB7 885 aaKnown RBP12.31□□□□□ -0.44
MRPS28-208ENST00000521605 PGBD1Q96JS3 809 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 YME1L1Q96TA2 773 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 TMEM47Q9BQJ4 181 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 IGFLR1Q9H665 355 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 TFIP11Q9UBB9 837 aaKnown RBP12.31□□□□□ -0.44
MRPS28-208ENST00000521605 PRR12Q9ULL5 1215 aa12.31□□□□□ -0.44
MRPS28-208ENST00000521605 H0Y858 1186 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 NFIBO00712 420 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.44
MRPS28-208ENST00000521605 SPTLC2O15270 562 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 LGR5O75473 907 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 PARNO95453 639 aaKnown RBP12.3□□□□□ -0.44
MRPS28-208ENST00000521605 SCG2P13521 617 aa12.3□□□□□ -0.44
MRPS28-208ENST00000521605 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
MRPS28-208ENST00000521605 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms