RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 LRIG1Q96JA1 1093 aa10.45□□□□□ -0.74
PVT1-210ENST00000521122 DDX23Q9BUQ8 820 aaKnown RBP10.45□□□□□ -0.74
PVT1-210ENST00000521122 USP44Q9H0E7 712 aa10.45□□□□□ -0.74
PVT1-210ENST00000521122 SNRKQ9NRH2 765 aa10.45□□□□□ -0.74
PVT1-210ENST00000521122 DZANK1Q9NVP4 752 aa10.45□□□□□ -0.74
PVT1-210ENST00000521122 MCM9Q9NXL9 1143 aa10.45□□□□□ -0.74
PVT1-210ENST00000521122 RELNP78509 3460 aa10.45□□□□□ -0.74
PVT1-210ENST00000521122 FRMPD2Q68DX3 1309 aaPredicted RBP10.44□□□□□ -0.74
PVT1-210ENST00000521122 ALAS1P13196 640 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 TDGF1P13385 188 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 TFCP2Q12800 502 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 MUM1L1Q5H9M0 696 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 NSMFQ6X4W1 530 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 THNSL1Q8IYQ7 743 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 DYNLL2Q96FJ2 89 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 UBL7Q96S82 380 aaPredicted RBP10.44□□□□□ -0.74
PVT1-210ENST00000521122 SLC2A4RGQ9NR83 387 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 CREBBPQ92793 2442 aa10.44□□□□□ -0.74
PVT1-210ENST00000521122 SEC24BO95487 1268 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 GH1P01241 217 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 ARHGAP1Q07960 439 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 SIM2Q14190 667 aaPredicted RBP10.43□□□□□ -0.74
PVT1-210ENST00000521122 NPAS4Q8IUM7 802 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 HNRNPLLQ8WVV9 542 aaKnown RBP10.43□□□□□ -0.74
PVT1-210ENST00000521122 MRPS27Q92552 414 aaKnown RBP10.43□□□□□ -0.74
PVT1-210ENST00000521122 ATP6V0A1Q93050 837 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 KLHL5Q96PQ7 755 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 COPRSQ9NQ92 184 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
PVT1-210ENST00000521122 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
PVT1-210ENST00000521122 NBPF19A0A087WUL8 3843 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 SHROOM3Q8TF72 1996 aa10.43□□□□□ -0.74
PVT1-210ENST00000521122 FAM170BA6NMN3 283 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 N4BP1O75113 896 aaKnown RBP10.42□□□□□ -0.74
PVT1-210ENST00000521122 CLASP2O75122 1294 aaKnown RBP10.42□□□□□ -0.74
PVT1-210ENST00000521122 ZNF806P0C7X5 589 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 ZNF286BP0CG31 522 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 CYP2D6P10635 497 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 EDNRBP24530 442 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 HOXC8P31273 242 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 PDE4DQ08499 809 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 UBXN2BQ14CS0 331 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 FAM26DQ5JW98 314 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 SPOUT1Q5T280 376 aaKnown RBP10.42□□□□□ -0.74
PVT1-210ENST00000521122 CCDC62Q6P9F0 684 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 GPR149Q86SP6 731 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 FEZF2Q8TBJ5 459 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 CLDN23Q96B33 292 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 BCAS3Q9H6U6 928 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 SCUBE2Q9NQ36 999 aa10.42□□□□□ -0.74
PVT1-210ENST00000521122 PIH1D3Q9NQM4 214 aaKnown RBP10.42□□□□□ -0.74
PVT1-210ENST00000521122 C17orf102A2RUQ5 167 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 HYAL3O43820 417 aaPredicted RBP10.41□□□□□ -0.74
PVT1-210ENST00000521122 STAG3L1P0CL83 205 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 GHRP10912 638 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 PLCB3Q01970 1234 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 BAATQ14032 418 aaPredicted RBP10.41□□□□□ -0.74
PVT1-210ENST00000521122 LETM2Q2VYF4 491 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 TMC5Q6UXY8 1006 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 CHST3Q7LGC8 479 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 COLGALT1Q8NBJ5 622 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 LINC01599Q8WXQ3 324 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 RIOK1Q9BRS2 568 aaKnown RBP10.41□□□□□ -0.74
PVT1-210ENST00000521122 EHMT1Q9H9B1 1298 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 EPS15L1Q9UBC2 864 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 KLK13Q9UKR3 277 aa10.41□□□□□ -0.74
PVT1-210ENST00000521122 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.41□□□□□ -0.74
PVT1-210ENST00000521122 FBN2P35556 2912 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 URB1O60287 2271 aaKnown RBP10.4□□□□□ -0.74
PVT1-210ENST00000521122 C2orf71A6NGG8 1288 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 CEACAM1P13688 526 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 RPS9P46781 194 aaKnown RBP10.4□□□□□ -0.74
PVT1-210ENST00000521122 CDK8P49336 464 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 GATMP50440 423 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 PRKCQQ04759 706 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 SH3PXD2AQ5TCZ1 1133 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 KIAA1211LQ6NV74 962 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 TMC7Q7Z402 723 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 RPAP2Q8IXW5 612 aaPredicted RBP10.4□□□□□ -0.74
PVT1-210ENST00000521122 ZNF843Q8N446 348 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 MRPL43Q8N983 215 aaKnown RBP10.4□□□□□ -0.74
PVT1-210ENST00000521122 MYADMQ96S97 322 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 MPHOSPH6Q99547 160 aaKnown RBP10.4□□□□□ -0.74
PVT1-210ENST00000521122 MKNK1Q9BUB5 465 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 LTB4R2Q9NPC1 389 aa10.4□□□□□ -0.74
PVT1-210ENST00000521122 DOCK8Q8NF50 2099 aa10.4□□□□□ -0.75
PVT1-210ENST00000521122 C2orf16Q68DN1 1984 aa10.39□□□□□ -0.75
PVT1-210ENST00000521122 PTPRQQ9UMZ3 2332 aa10.39□□□□□ -0.75
PVT1-210ENST00000521122 SNW1Q13573 536 aaKnown RBP10.39□□□□□ -0.75
PVT1-210ENST00000521122 SMC1AQ14683 1233 aaKnown RBP10.39□□□□□ -0.75
PVT1-210ENST00000521122 LPIN1Q14693 890 aa10.39□□□□□ -0.75
PVT1-210ENST00000521122 MLF2Q15773 248 aaPredicted RBP10.39□□□□□ -0.75
PVT1-210ENST00000521122 LY6KQ17RY6 165 aa10.39□□□□□ -0.75
PVT1-210ENST00000521122 ZBTB41Q5SVQ8 909 aa10.39□□□□□ -0.75
PVT1-210ENST00000521122 RNF43Q68DV7 783 aa10.39□□□□□ -0.75
PVT1-210ENST00000521122 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
PVT1-210ENST00000521122 PCGF6Q9BYE7 350 aa10.39□□□□□ -0.75
PVT1-210ENST00000521122 CCDC8Q9H0W5 538 aaPredicted RBP10.39□□□□□ -0.75
PVT1-210ENST00000521122 NYAP2Q9P242 653 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms