RNA–Protein interactions for RNA: ENST00000521001.1

TNIP1-209, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 4

Gene TNIP1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-209ENST00000521001 NFRKBQ6P4R8 1299 aa11.35□□□□□ -0.59
TNIP1-209ENST00000521001 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
TNIP1-209ENST00000521001 GIMAP8Q8ND71 665 aaPredicted RBP11.35□□□□□ -0.59
TNIP1-209ENST00000521001 FAM20AQ96MK3 541 aa11.35□□□□□ -0.59
TNIP1-209ENST00000521001 GLT1D1Q96MS3 346 aa11.35□□□□□ -0.59
TNIP1-209ENST00000521001 HSD17B14Q9BPX1 270 aa11.35□□□□□ -0.59
TNIP1-209ENST00000521001 MMTAG2Q9BU76 263 aaKnown RBP11.35□□□□□ -0.59
TNIP1-209ENST00000521001 SPC25Q9HBM1 224 aa11.35□□□□□ -0.59
TNIP1-209ENST00000521001 MBLAC1A4D2B0 266 aaPredicted RBP11.34□□□□□ -0.59
TNIP1-209ENST00000521001 ZBTB39O15060 712 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 NEMFO60524 1076 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 KPNA6O60684 536 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 BRD1O95696 1058 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 SMIM10L2AP0DMW4 78 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 SMIM10L2BP0DMW5 78 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 ATP2C1P98194 919 aaPredicted RBP11.34□□□□□ -0.59
TNIP1-209ENST00000521001 KRT76Q01546 638 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 MLLT1Q03111 559 aaPredicted RBP11.34□□□□□ -0.59
TNIP1-209ENST00000521001 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
TNIP1-209ENST00000521001 TARBP2Q15633 366 aaKnown RBP11.34□□□□□ -0.59
TNIP1-209ENST00000521001 TCTN1Q2MV58 587 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 SWSAP1Q6NVH7 229 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 PLPPR4Q7Z2D5 763 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 LINC01465Q8N7H1 131 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 TRAPPC12Q8WVT3 735 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 SDF4Q9BRK5 362 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 TEKT3Q9BXF9 490 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 WNT8AQ9H1J5 351 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 BRMS1Q9HCU9 246 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 DISC1Q9NRI5 854 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 SETD4Q9NVD3 440 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
TNIP1-209ENST00000521001 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
TNIP1-209ENST00000521001 H0YGN5 161 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 KIAA0355O15063 1070 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 TREHO43280 583 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 CHMP2AO43633 222 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 PQBP1O60828 265 aaKnown RBP11.33□□□□□ -0.6
TNIP1-209ENST00000521001 GAS7O60861 476 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 SLITRK3O94933 977 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 CYP2C9P11712 490 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 SYN1P17600 705 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 MARK3P27448 753 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 FXR2P51116 673 aaKnown RBP eCLIP11.33□□□□□ -0.68e-6■■■■□ 21.8
TNIP1-209ENST00000521001 STAT5BP51692 787 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 EPHB4P54760 987 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 RBL2Q08999 1139 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 MKRN4PQ13434 485 aaPredicted RBP11.33□□□□□ -0.6
TNIP1-209ENST00000521001 MBTPS1Q14703 1052 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 CALCRLQ16602 461 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 RILPL1Q5EBL4 403 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 MCTP1Q6DN14 999 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 C16orf59Q7L2K0 433 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 SMAP1Q8IYB5 467 aaPredicted RBP11.33□□□□□ -0.6
TNIP1-209ENST00000521001 C7orf61Q8IZ16 206 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 IGSF22Q8N9C0 903 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 TTC12Q9H892 705 aaPredicted RBP11.33□□□□□ -0.6
TNIP1-209ENST00000521001 RGL1Q9NZL6 768 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 ATP11BQ9Y2G3 1177 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 PCDHA10Q9Y5I2 948 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 COL4A6Q14031 1691 aa11.33□□□□□ -0.6
TNIP1-209ENST00000521001 A0A087WWV3 80 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 PP2D1A8MPX8 630 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 H3BQV1 296 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 NOP56O00567 594 aaKnown RBP11.32□□□□□ -0.6
TNIP1-209ENST00000521001 ZEB2O60315 1214 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 MED24O75448 989 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 F13A1P00488 732 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 OR52Z1P0C646 297 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 ZSCAN22P10073 491 aaPredicted RBP11.32□□□□□ -0.6
TNIP1-209ENST00000521001 INSRRP14616 1297 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 PDCP20941 246 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 TXKP42681 527 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
TNIP1-209ENST00000521001 ORC2Q13416 577 aaPredicted RBP11.32□□□□□ -0.6
TNIP1-209ENST00000521001 USP49Q70CQ1 688 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 ANO5Q75V66 913 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 SERINC5Q86VE9 423 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 BANK1Q8NDB2 785 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 SH2D3AQ9BRG2 576 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 NOC4LQ9BVI4 516 aaKnown RBP11.32□□□□□ -0.6
TNIP1-209ENST00000521001 SMARCAD1Q9H4L7 1026 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 ZNF302Q9NR11 478 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 GABBR1Q9UBS5 961 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 ZMYND8Q9ULU4 1186 aaPredicted RBP11.32□□□□□ -0.6
TNIP1-209ENST00000521001 LAMA3Q16787 3333 aa11.32□□□□□ -0.6
TNIP1-209ENST00000521001 WDR64B1ANS9 1081 aa11.31□□□□□ -0.6
TNIP1-209ENST00000521001 CLTBP09497 229 aa11.31□□□□□ -0.6
TNIP1-209ENST00000521001 CDC25AP30304 524 aa11.31□□□□□ -0.6
TNIP1-209ENST00000521001 TECP42680 631 aa11.31□□□□□ -0.6
TNIP1-209ENST00000521001 NASPP49321 788 aaPredicted RBP11.31□□□□□ -0.6
TNIP1-209ENST00000521001 DRP2Q13474 957 aa11.31□□□□□ -0.6
TNIP1-209ENST00000521001 EPHA7Q15375 998 aa11.31□□□□□ -0.6
TNIP1-209ENST00000521001 SF3A1Q15459 793 aaKnown RBP11.31□□□□□ -0.6
TNIP1-209ENST00000521001 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
TNIP1-209ENST00000521001 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
TNIP1-209ENST00000521001 BRAPQ7Z569 592 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms