RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 TNPO1Q92973 898 aaKnown RBP12.24□□□□□ -0.45
PVT1-209ENST00000520913 PHKBQ93100 1093 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 RAD9AQ99638 391 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 AGO4Q9HCK5 861 aaKnown RBP12.24□□□□□ -0.45
PVT1-209ENST00000520913 LCHNA4D1U4 455 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 MEIS1O00470 390 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 ARP10275 920 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 IFNAR1P17181 557 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 GNA11P29992 359 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 EVCP57679 992 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 ACTR2P61160 394 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 ITGB3BPQ13352 177 aaPredicted RBP12.23□□□□□ -0.45
PVT1-209ENST00000520913 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
PVT1-209ENST00000520913 PKN1Q16512 942 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 FAM26DQ5JW98 314 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 JAKMIP3Q5VZ66 844 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 MYOCDQ8IZQ8 938 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 MICALL1Q8N3F8 863 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 CYP2W1Q8TAV3 490 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 SYMPKQ92797 1274 aaKnown RBP12.23□□□□□ -0.45
PVT1-209ENST00000520913 IFIH1Q9BYX4 1025 aaKnown RBP12.23□□□□□ -0.45
PVT1-209ENST00000520913 CERS4Q9HA82 394 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 CYP46A1Q9Y6A2 500 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 TTC3P53804 2025 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 ARID2Q68CP9 1835 aa12.23□□□□□ -0.45
PVT1-209ENST00000520913 IGLV3-22A0A075B6J6 115 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 MBLAC1A4D2B0 266 aaPredicted RBP12.22□□□□□ -0.45
PVT1-209ENST00000520913 EPOPA6NHQ4 379 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 RRN3P2A6NIE6 340 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 CYP3A4P08684 503 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 POU3F3P20264 500 aaPredicted RBP12.22□□□□□ -0.45
PVT1-209ENST00000520913 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
PVT1-209ENST00000520913 SLC26A2P50443 739 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 IGBP1P78318 339 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 MGAT3Q09327 533 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
PVT1-209ENST00000520913 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
PVT1-209ENST00000520913 NTRK3Q16288 839 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 TJAP1Q5JTD0 557 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.22□□□□□ -0.45
PVT1-209ENST00000520913 RUFY4Q6ZNE9 571 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 PLPPR4Q7Z2D5 763 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 PLA2G4DQ86XP0 818 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 CRYGNQ8WXF5 182 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 PCYT2Q99447 389 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 TM6SF1Q9BZW5 370 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
PVT1-209ENST00000520913 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 TCEAL9Q9UHQ7 104 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 INSL6Q9Y581 213 aa12.22□□□□□ -0.45
PVT1-209ENST00000520913 FNDC1Q4ZHG4 1894 aaPredicted RBP12.22□□□□□ -0.45
PVT1-209ENST00000520913 TCF20Q9UGU0 1960 aaKnown RBP12.21□□□□□ -0.45
PVT1-209ENST00000520913 LINC01553A4QN01 128 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 FAM86B1E9PN63 330 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
PVT1-209ENST00000520913 FAM86B2P0C5J1 330 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 GHRP10912 638 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 STAT5BP51692 787 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 CCT2P78371 535 aaKnown RBP12.21□□□□□ -0.45
PVT1-209ENST00000520913 HTRA4P83105 476 aaPredicted RBP12.21□□□□□ -0.45
PVT1-209ENST00000520913 PLCB4Q15147 1175 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 FAM117BQ6P1L5 589 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 SPRED2Q7Z698 418 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 TRIM22Q8IYM9 498 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 ATXN2LQ8WWM7 1075 aaKnown RBP12.21□□□□□ -0.45
PVT1-209ENST00000520913 TGS1Q96RS0 853 aaKnown RBP12.21□□□□□ -0.45
PVT1-209ENST00000520913 NCOA5Q9HCD5 579 aaKnown RBP12.21□□□□□ -0.45
PVT1-209ENST00000520913 PRDM6Q9NQX0 595 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.45
PVT1-209ENST00000520913 COL1A2P08123 1366 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 IGKV6D-21A0A0A0MT36 114 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 M0QZ92 97 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 RFXAPO00287 272 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 IPO5O00410 1097 aaKnown RBP12.2□□□□□ -0.46
PVT1-209ENST00000520913 CPLX1O14810 134 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 BACH1O14867 736 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 ATG7O95352 703 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 INSRRP14616 1297 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 ERVK-21P61565 698 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 MRPS6P82932 125 aaKnown RBP12.2□□□□□ -0.46
PVT1-209ENST00000520913 GRB10Q13322 594 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 MARCH8Q5T0T0 291 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 ERICH6BQ5W0A0 696 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 CPLX2Q6PUV4 134 aaKnown RBP12.2□□□□□ -0.46
PVT1-209ENST00000520913 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 TSHZ1Q6ZSZ6 1077 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 CCDC60Q8IWA6 550 aaPredicted RBP12.2□□□□□ -0.46
PVT1-209ENST00000520913 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
PVT1-209ENST00000520913 GDPD5Q8WTR4 605 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 DNAJB3Q8WWF6 145 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 ZNF274Q96GC6 653 aaPredicted RBP12.2□□□□□ -0.46
PVT1-209ENST00000520913 ZNF577Q9BSK1 485 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 OSBPL7Q9BZF2 842 aa12.2□□□□□ -0.46
PVT1-209ENST00000520913 UPF3BQ9BZI7 483 aaKnown RBP12.2□□□□□ -0.46
PVT1-209ENST00000520913 SH3GLB2Q9NR46 395 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms