RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SYNPOQ8N3V7 929 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 THAP3Q8WTV1 239 aaPredicted RBP5.81□□□□□ -1.48
SQLE-204ENST00000520493 CLEC4DQ8WXI8 215 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 DNAJC7Q99615 494 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 DHRS4Q9BTZ2 278 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 CATSPERZQ9NTU4 200 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 TMEM260Q9NX78 707 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.81□□□□□ -1.48
SQLE-204ENST00000520493 INVSQ9Y283 1065 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 PRKAB1Q9Y478 270 aa5.81□□□□□ -1.48
SQLE-204ENST00000520493 PPM1GO15355 546 aaPredicted RBP5.8□□□□□ -1.48
SQLE-204ENST00000520493 DIAPH1O60610 1272 aaKnown RBP5.8□□□□□ -1.48
SQLE-204ENST00000520493 CHGBP05060 677 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 EPHA5P54756 1037 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 MLLT6P55198 1093 aaPredicted RBP5.8□□□□□ -1.48
SQLE-204ENST00000520493 TAF7LQ5H9L4 462 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 FAM47CQ5HY64 1035 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 RNF187Q5TA31 235 aaPredicted RBP5.8□□□□□ -1.48
SQLE-204ENST00000520493 CPZQ66K79 652 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 RBM12BQ8IXT5 1001 aaKnown RBP5.8□□□□□ -1.48
SQLE-204ENST00000520493 LILRB2Q8N423 598 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 SH3TC2Q8TF17 1288 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 FBXW5Q969U6 566 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 YTHDC1Q96MU7 727 aaKnown RBP5.8□□□□□ -1.48
SQLE-204ENST00000520493 PDGFDQ9GZP0 370 aaPredicted RBP5.8□□□□□ -1.48
SQLE-204ENST00000520493 ASXL2Q76L83 1435 aa5.8□□□□□ -1.48
SQLE-204ENST00000520493 CDC45O75419 566 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 LTFP02788 710 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 ITGB3P05106 788 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 FAM153BP0C7A2 387 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 TACR2P21452 398 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 GPR19Q15760 415 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 SMAD2Q15796 467 aaKnown RBP5.79□□□□□ -1.48
SQLE-204ENST00000520493 SKIDA1Q1XH10 827 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 C2orf27AQ580R0 203 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 CD276Q5ZPR3 534 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 GLB1LQ6UWU2 654 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 KLHL36Q8N4N3 616 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 DTX3Q8N9I9 347 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 ZCRB1Q8TBF4 217 aaKnown RBP5.79□□□□□ -1.48
SQLE-204ENST00000520493 ARHGAP20Q9P2F6 1191 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 MRPS23Q9Y3D9 190 aaKnown RBP5.79□□□□□ -1.48
SQLE-204ENST00000520493 PCDHA8Q9Y5H6 950 aa5.79□□□□□ -1.48
SQLE-204ENST00000520493 CCDC163A0A0D9SF12 145 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 C1QTNF3-AMACRE9PGA6 284 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 CYR61O00622 381 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 WNT9AO14904 365 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 LAMTOR5O43504 91 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 EFCAB14O75071 495 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 CKMP06732 381 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 GJA4P35212 333 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 CRY1Q16526 586 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 TBC1D10BQ4KMP7 808 aaPredicted RBP5.78□□□□□ -1.48
SQLE-204ENST00000520493 ARHGAP36Q6ZRI8 547 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 C16orf86Q6ZW13 317 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 KIAA0907Q7Z7F0 614 aaPredicted RBP5.78□□□□□ -1.48
SQLE-204ENST00000520493 ZC3H7AQ8IWR0 971 aaKnown RBP5.78□□□□□ -1.48
SQLE-204ENST00000520493 ZCCHC14Q8WYQ9 949 aaKnown RBP5.78□□□□□ -1.48
SQLE-204ENST00000520493 EXOC2Q96KP1 924 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 CD244Q9BZW8 370 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 SLKQ9H2G2 1235 aaPredicted RBP5.78□□□□□ -1.48
SQLE-204ENST00000520493 RBPJLQ9UBG7 517 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 ZFP69BQ9UJL9 534 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 SRPK3Q9UPE1 567 aa5.78□□□□□ -1.48
SQLE-204ENST00000520493 ARVCFO00192 962 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 C6orf222P0C671 652 aaPredicted RBP5.77□□□□□ -1.49
SQLE-204ENST00000520493 SRGAP2CP0DJJ0 459 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 PFKPQ01813 784 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 NFATC3Q12968 1075 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 FIGNQ5HY92 759 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 FOXB2Q5VYV0 432 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 BTBD8Q5XKL5 378 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 ARHGEF18Q6ZSZ5 1173 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 C16orf59Q7L2K0 433 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 PROSER1Q86XN7 944 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 KBTBD2Q8IY47 623 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 Q8N1X5 172 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 ZSWIM2Q8NEG5 633 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 IGDCC4Q8TDY8 1250 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 LOXL4Q96JB6 756 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 JADE2Q9NQC1 790 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 RIC8BQ9NVN3 520 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 FANCLQ9NW38 375 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 ARHGAP28Q9P2N2 729 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 NDOR1Q9UHB4 597 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 WASF3Q9UPY6 502 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 ZDHHC9Q9Y397 364 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 ATP23Q9Y6H3 246 aa5.77□□□□□ -1.49
SQLE-204ENST00000520493 ZNF839A8K0R7 811 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 PPP1R12AO14974 1030 aaPredicted RBP5.76□□□□□ -1.49
SQLE-204ENST00000520493 B4GALT3O60512 393 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 CRTAMO95727 393 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 PYGMP11217 842 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 PDE6AP16499 860 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 ZNF20P17024 532 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
SQLE-204ENST00000520493 KRT15P19012 456 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 IBSPP21815 317 aaPredicted RBP5.76□□□□□ -1.49
SQLE-204ENST00000520493 GLRBP48167 497 aa5.76□□□□□ -1.49
SQLE-204ENST00000520493 PKN3Q6P5Z2 889 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms