RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 INSL6Q9Y581 213 aa18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 MTCH2Q9Y6C9 303 aa18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 PTPRSQ13332 1948 aa18.38■□□□□ 0.53
IGHV3-42-201ENST00000520410 LINC01553A4QN01 128 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 INSRRP14616 1297 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 STAT5BP51692 787 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 TMEM62Q0P6H9 643 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 FAM160B1Q5W0V3 765 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 CKAP2LQ8IYA6 745 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 CCDC148Q8NFR7 591 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 APBB2Q92870 758 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 NCOA5Q9HCD5 579 aaKnown RBP18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 CDY2AQ9Y6F7 541 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 NFASCO94856 1347 aa18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 COL4A4P53420 1690 aaPredicted RBP18.37■□□□□ 0.53
IGHV3-42-201ENST00000520410 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 CPLX1O14810 134 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 PRPF3O43395 683 aaKnown RBP18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 GNA11P29992 359 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 STK3Q13188 491 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 ITGB3BPQ13352 177 aaPredicted RBP18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 FBXO22Q8NEZ5 403 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 RASGRP4Q8TDF6 673 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 TRAPPC12Q8WVT3 735 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 ASB2Q96Q27 587 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 ZNF577Q9BSK1 485 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 OSBPL7Q9BZF2 842 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
IGHV3-42-201ENST00000520410 POTEB3A0JP26 581 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 CLK2P49760 499 aaKnown RBP18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 NLRP5P59047 1200 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 TFF2Q03403 129 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 MCTP2Q6DN12 878 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 POTEBQ6S5H4 581 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 RUFY3Q7L099 469 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 TEX2Q8IWB9 1127 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 TRIM22Q8IYM9 498 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 BICD2Q8TD16 824 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 KCNB2Q92953 911 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 PCYT2Q99447 389 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 LARP6Q9BRS8 491 aaKnown RBP18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 C17orf80Q9BSJ5 609 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 VPS54Q9P1Q0 977 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 GINS2Q9Y248 185 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 SAMM50Q9Y512 469 aa18.35■□□□□ 0.53
IGHV3-42-201ENST00000520410 FAM86B1E9PN63 330 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 CHRNA1P02708 482 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 FAM86B2P0C5J1 330 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 ADAM17P78536 824 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 MRPS6P82932 125 aaKnown RBP18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 SETQ01105 290 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 PLCB4Q15147 1175 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 AAK1Q2M2I8 961 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 PRR16Q569H4 304 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 IER5Q5VY09 327 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 MIS18BP1Q6P0N0 1132 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 ADAMTS19Q8TE59 1207 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 UPF3BQ9BZI7 483 aaKnown RBP18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 ZNF302Q9NR11 478 aa18.34■□□□□ 0.53
IGHV3-42-201ENST00000520410 ESYT2A0FGR8 921 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 IPO5O00410 1097 aaKnown RBP18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 MEIS1O00470 390 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 ERVK-21P61565 698 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 SSRP1Q08945 709 aaKnown RBP18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 FAM26DQ5JW98 314 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 PDXDC2PQ6P474 469 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 CPLX2Q6PUV4 134 aaKnown RBP18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 RNF26Q9BY78 433 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 ZMYND12Q9H0C1 365 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 SUGCTQ9HAC7 445 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 TRPV2Q9Y5S1 764 aa18.33■□□□□ 0.52
IGHV3-42-201ENST00000520410 MICAL3Q7RTP6 2002 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 CSPG5O95196 566 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 LPIN1Q14693 890 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 PKN1Q16512 942 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 MARCH8Q5T0T0 291 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 SWSAP1Q6NVH7 229 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 TSHZ1Q6ZSZ6 1077 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 PLPPR4Q7Z2D5 763 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 TOP1MTQ969P6 601 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 PPP1R16BQ96T49 567 aa18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 UHRF1Q96T88 793 aaPredicted RBP18.32■□□□□ 0.52
IGHV3-42-201ENST00000520410 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 NID2Q14112 1375 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 MBLAC1A4D2B0 266 aaPredicted RBP18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 TNFRSF10AO00220 468 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 ADAMTS3O15072 1205 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 CHMP2AO43633 222 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 CCNE2O96020 404 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 RPLP2P05387 115 aaKnown RBP18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 IFNAR1P17181 557 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 CD52P31358 61 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 KCNQ1P51787 676 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 MGAT3Q09327 533 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 PAK2Q13177 524 aa18.31■□□□□ 0.52
IGHV3-42-201ENST00000520410 FBXO47Q5MNV8 452 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms